RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ITM2AO43736 263 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 CDC40O60508 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX3-204ENST00000426155 SEC22BO75396 215 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 SKAP2O75563 359 aaPredicted RBP12.56□□□□□ -0.4
SNX3-204ENST00000426155 STSP08842 583 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 FBXO45P0C2W1 286 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 DRD2P14416 443 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 DDCP20711 480 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 RPL38P63173 70 aaKnown RBP12.56□□□□□ -0.4
SNX3-204ENST00000426155 MAP4K2Q12851 820 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 GALNTL6Q49A17 601 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 FAM71E1Q6IPT2 247 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 ANKRD26P1Q6NSI1 321 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 FAM47EQ6ZV65 393 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 FGD2Q7Z6J4 655 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 CHERPQ8IWX8 916 aaKnown RBP12.56□□□□□ -0.4
SNX3-204ENST00000426155 ZFP62Q8NB50 900 aaPredicted RBP12.56□□□□□ -0.4
SNX3-204ENST00000426155 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 OR52R1Q8NGF1 315 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 OR52N2Q8NGI0 321 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 OR6Y1Q8NGX8 325 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 CLHC1Q8NHS4 586 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 GFM2Q969S9 779 aaKnown RBP12.56□□□□□ -0.4
SNX3-204ENST00000426155 ADIPOR1Q96A54 375 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 NXF5Q9H1B4 397 aaKnown RBP12.56□□□□□ -0.4
SNX3-204ENST00000426155 LRTM1Q9HBL6 345 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 MYNNQ9NPC7 610 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 SLC35C2Q9NQQ7 365 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 PSME2Q9UL46 239 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 ENTPD4Q9Y227 616 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 TRAF6Q9Y4K3 522 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 FREM3P0C091 2139 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 ATP6AP2A0A1C7CYW4 349 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 SLC28A1O00337 649 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 LSM1O15116 133 aaKnown RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 RGS14O43566 566 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 ASNA1O43681 348 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 SLC19A2O60779 497 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 ATP6AP2O75787 350 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 JUNP05412 331 aaKnown RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 TUBBP07437 444 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 SDC1P18827 310 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 PRPH2P23942 346 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 FBXW4P57775 412 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 CHI3L2Q15782 390 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 RFTN2Q52LD8 501 aaPredicted RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 CMPK2Q5EBM0 449 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 BEND6Q5SZJ8 279 aaPredicted RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 BICRALQ6AI39 1079 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 DESI1Q6ICB0 168 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 NCCRP1Q6ZVX7 275 aaPredicted RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 NUDCD3Q8IVD9 361 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 GOLM1Q8NBJ4 401 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 OR7G1Q8NGA0 311 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 CTHRC1Q96CG8 243 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 C3orf30Q96M34 536 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 TSSK3Q96PN8 268 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 TTTY12Q9BZ98 90 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 SH2D2AQ9NP31 389 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 KCNK9Q9NPC2 374 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 MIEF1Q9NQG6 463 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 SACM1LQ9NTJ5 587 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 C1orf109Q9NX04 203 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 TUBA8Q9NY65 449 aaPredicted RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 EHD3Q9NZN3 535 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 TINAGQ9UJW2 476 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 CHCHD2Q9Y6H1 151 aaPredicted RBP12.55□□□□□ -0.4
SNX3-204ENST00000426155 DNAJC13O75165 2243 aa12.55□□□□□ -0.4
SNX3-204ENST00000426155 NPIPB8E9PQR5 432 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 ZG16O60844 167 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 PDE9AO76083 593 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 CHEK2O96017 543 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 P04436 131 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 FGF4P08620 206 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 CELA3AP09093 270 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 NEFHP12036 1026 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 EMDP50402 254 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 PLGLB1Q02325 96 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 CEBPEQ15744 281 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 C3AR1Q16581 482 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 XKR7Q5GH72 579 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 LRIG3Q6UXM1 1119 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 RNF165Q6ZSG1 346 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 CLYBLQ8N0X4 340 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 ANKRD42Q8N9B4 389 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 POGLUT1Q8NBL1 392 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 OR7G2Q8NG99 324 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 PPP1R14CQ8TAE6 165 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 PAQR8Q8TEZ7 354 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 PGM2Q96G03 612 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 MAGED4Q96JG8 741 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 FCRL1Q96LA6 429 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 SGCZQ96LD1 299 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 BBS4Q96RK4 519 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 FAM173AQ9BQD7 235 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 C20orf27Q9GZN8 174 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 DEFB127Q9H1M4 99 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 PROK2Q9HC23 129 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms