RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 GABARAPL1Q9H0R8 117 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 RUBCNLQ9H714 662 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 UBAP1Q9NZ09 502 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 HCN3Q9P1Z3 774 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 LIPT1Q9Y234 373 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 MRPS33Q9Y291 106 aaKnown RBP14.24□□□□□ -0.13
ACTB-204ENST00000425660 TMEM184BQ9Y519 407 aaPredicted RBP14.24□□□□□ -0.13
ACTB-204ENST00000425660 ASXL3Q9C0F0 2248 aa14.24□□□□□ -0.13
ACTB-204ENST00000425660 DSPPQ9NZW4 1301 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 MAGEA13PA6NCF6 341 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 TMEM150CB9EJG8 249 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 CASC3O15234 703 aaKnown RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 SLC28A2O43868 658 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 CTNSO60931 367 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 E2F6O75461 281 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 SERPINB7O75635 380 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 BMP10O95393 424 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 RECKO95980 971 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 AGR2O95994 175 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 NR2F1P10589 423 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 FOLR1P15328 257 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 ITGA2P17301 1181 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 DNAJA1P31689 397 aaKnown RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 KCNC4Q03721 635 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 TRMT12Q53H54 448 aaKnown RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 PERM1Q5SV97 790 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 HEPHL1Q6MZM0 1159 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 CDC73Q6P1J9 531 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 SLC44A2Q8IWA5 706 aaPredicted RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 SMYD1Q8NB12 490 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 MMABQ96EY8 250 aaPredicted RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 TRNT1Q96Q11 434 aaKnown RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 ZNF300Q96RE9 604 aaPredicted RBP14.23□□□□□ -0.13
ACTB-204ENST00000425660 ZNF347Q96SE7 839 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 YIPF4Q9BSR8 244 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 CUTCQ9NTM9 273 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 IRAK4Q9NWZ3 460 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 MAT2BQ9NZL9 334 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 CLDN16Q9Y5I7 305 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 U3KQV3 271 aa14.23□□□□□ -0.13
ACTB-204ENST00000425660 A0A0G2JPF8 293 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 HNRNPCL2B2RXH8 293 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 HNRNPCL3B7ZW38 293 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 DIRAS1O95057 198 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 CPNE6O95741 557 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 LYNP07948 512 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 CHRM4P08173 479 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 SYPP08247 313 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 HNRNPCL4P0DMR1 293 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 FPR1P21462 350 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 KCNJ5P48544 419 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 BLMHQ13867 455 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 PUM1Q14671 1186 aaKnown RBP eCLIP14.22□□□□□ -0.135e-11■■■□□ 17.7
ACTB-204ENST00000425660 ZCCHC12Q6PEW1 402 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 ZNF574Q6ZN55 896 aaPredicted RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 TMPRSS9Q7Z410 1059 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 KRT73Q86Y46 540 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 ST13P4Q8IZP2 240 aaPredicted RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 HS3ST5Q8IZT8 346 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 GPR32P1Q8NGA4 272 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 OR1L3Q8NH93 324 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 PEX11GQ96HA9 241 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 EPYCQ99645 322 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 EQTNQ9NQ60 294 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 GIN1Q9NXP7 522 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 KCNE3Q9Y6H6 103 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 A0A1W2PQM1 296 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 CPED1A4D0V7 1026 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 CLDN4O14493 209 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 ADAMDEC1O15204 470 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 ZNF749O43361 778 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 FESP07332 822 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 XCR1P46094 333 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 OR1E2P47887 323 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 ARHGDIAP52565 204 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 HSD17B7P56937 341 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 MAT1AQ00266 395 aaKnown RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 MAP4K2Q12851 820 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 SNAP47Q5SQN1 464 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 YOD1Q5VVQ6 348 aaPredicted RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 ARHGAP22Q7Z5H3 698 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 SLC16A11Q8NCK7 471 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 SIMC1Q8NDZ2 872 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 OR4D9Q8NGE8 314 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 OR51Q1Q8NH59 317 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 HOXB13Q92826 284 aaPredicted RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 ZNF501Q96CX3 271 aaPredicted RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 OTUB1Q96FW1 271 aaPredicted RBP14.22□□□□□ -0.13
ACTB-204ENST00000425660 CNBD2Q96M20 576 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 COL21A1Q96P44 957 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 SPATA5L1Q9BVQ7 753 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 REEP1Q9H902 201 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 CALML5Q9NZT1 146 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 SH3GLB1Q9Y371 365 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 PCDHGB3Q9Y5G1 929 aa14.22□□□□□ -0.13
ACTB-204ENST00000425660 H0YAE9 185 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 TGFBR3LH3BV60 316 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 TNFRSF10AO00220 468 aa14.21□□□□□ -0.13
ACTB-204ENST00000425660 DNAJB5O75953 348 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms