RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TRMT12Q53H54 448 aaKnown RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 PRAMEF8Q5VWM4 474 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 PRAMEF7Q5VXH5 474 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 ATG16L2Q8NAA4 619 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 ZNF354BQ96LW1 612 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 KIF17Q9P2E2 1029 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 A0A0G2JPF8 293 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 LOC100130705A0A1B0GUX0 176 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 HYKKA2RU49 373 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 HNRNPCL2B2RXH8 293 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 HNRNPCL3B7ZW38 293 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 JRKO75564 520 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 TFAP2AP05549 437 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 HNRNPCL4P0DMR1 293 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 ITGAMP11215 1152 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 ETS2P15036 469 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 CFHR1Q03591 330 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 FOXB2Q5VYV0 432 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 OR52J3Q8NH60 311 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 DOK4Q8TEW6 326 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 SLC35A4Q96G79 324 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 HCN3Q9P1Z3 774 aa24.83■■□□□ 1.57
LDB1-202ENST00000425280 SLC16A6O15403 523 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 LAMTOR5O43504 91 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 B4GAT1O43505 415 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 FAM53BQ14153 422 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 CDC73Q6P1J9 531 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 C8orf59Q8N0T1 100 aaPredicted RBP24.82■■□□□ 1.56
LDB1-202ENST00000425280 GIPC3Q8TF64 312 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 GAB3Q8WWW8 586 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 BTBD2Q9BX70 525 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 ACER3Q9NUN7 267 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 IRAK4Q9NWZ3 460 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 GIN1Q9NXP7 522 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 PILRBQ9UKJ0 227 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 C19orf53Q9UNZ5 99 aaPredicted RBP24.82■■□□□ 1.56
LDB1-202ENST00000425280 LIPT1Q9Y234 373 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 NT5EP21589 574 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 SKP1P63208 163 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 IL1RL1Q01638 556 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 EXOC3L2Q2M3D2 409 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 AMZ1Q400G9 498 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 THAP5Q7Z6K1 395 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 COMTD1Q86VU5 262 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 MAML2Q8IZL2 1156 aaPredicted RBP24.82■■□□□ 1.56
LDB1-202ENST00000425280 Q8N9G6 341 aaPredicted RBP24.82■■□□□ 1.56
LDB1-202ENST00000425280 SLC16A11Q8NCK7 471 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 ADAMTS15Q8TE58 950 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 TRNT1Q96Q11 434 aaKnown RBP24.82■■□□□ 1.56
LDB1-202ENST00000425280 SPRTNQ9H040 489 aaPredicted RBP24.82■■□□□ 1.56
LDB1-202ENST00000425280 EPB41L1Q9H4G0 881 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 KRT84Q9NSB2 600 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 LAMA1P25391 3075 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 SPTBP11277 2137 aa24.82■■□□□ 1.56
LDB1-202ENST00000425280 CACNA1EQ15878 2313 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 NSA2O95478 260 aaKnown RBP24.81■■□□□ 1.56
LDB1-202ENST00000425280 RNH1P13489 461 aaKnown RBP24.81■■□□□ 1.56
LDB1-202ENST00000425280 FUT4P22083 530 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 GPR3P46089 330 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 CSTF1Q05048 431 aaKnown RBP24.81■■□□□ 1.56
LDB1-202ENST00000425280 GANABQ14697 944 aaKnown RBP24.81■■□□□ 1.56
LDB1-202ENST00000425280 KCNAB1Q14722 419 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 TCTE1Q5JU00 501 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 GARNL3Q5VVW2 1013 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 OR4D11Q8NGI4 311 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 WFDC6Q9BQY6 131 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 SPATA5L1Q9BVQ7 753 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 RBCK1Q9BYM8 510 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 SLC38A1Q9H2H9 487 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 RIBC2Q9H4K1 309 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 A0A087WV62 115 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 TRIM64A6NGJ6 449 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 DUX1O43812 170 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 RPL5P46777 297 aaKnown RBP24.81■■□□□ 1.56
LDB1-202ENST00000425280 LIMS1P48059 325 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 HMGA2P52926 109 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 MGAT2Q10469 447 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 NR1D2Q14995 579 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 PRICKLE4Q2TBC4 344 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 FAM214AQ32MH5 1076 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 INAVAQ3KP66 663 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 PLK5Q496M5 336 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 ATAD3BQ5T9A4 648 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 NIPAL1Q6NVV3 410 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 HMGN2P46Q86SG4 172 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 MAT2BQ9NZL9 334 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 KCND3Q9UK17 655 aa24.81■■□□□ 1.56
LDB1-202ENST00000425280 DUXAA6NLW8 204 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 FFAR1O14842 300 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 MAT1AQ00266 395 aaKnown RBP24.8■■□□□ 1.56
LDB1-202ENST00000425280 MICAQ29983 383 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 LIN52Q52LA3 116 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 HEPHL1Q6MZM0 1159 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 C16orf62Q7Z3J2 963 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 RBM45Q8IUH3 476 aaKnown RBP24.8■■□□□ 1.56
LDB1-202ENST00000425280 OR10G2Q8NGC3 310 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 VANGL1Q8TAA9 524 aaPredicted RBP24.8■■□□□ 1.56
LDB1-202ENST00000425280 ZNF675Q8TD23 568 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 TMEM9Q9P0T7 183 aa24.8■■□□□ 1.56
LDB1-202ENST00000425280 PCDHGA8Q9Y5G5 932 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms