RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 COQ10AQ96MF6 247 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF558Q96NG5 402 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 SLC38A2Q96QD8 506 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 ATF6BQ99941 703 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 TREX2Q9BQ50 279 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 SLAMF7Q9NQ25 335 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 WASH6PQ9NQA3 447 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 PLSCR3Q9NRY6 295 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 MAN2C1Q9NTJ4 1040 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 CBLCQ9ULV8 474 aa14.38□□□□□ -0.11
C9orf3-204ENST00000424143 NDRG2Q9UN36 371 aaKnown RBP14.38□□□□□ -0.11
C9orf3-204ENST00000424143 PRR23AA6NEV1 266 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 A8MV72 311 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 PLPP1O14494 284 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 KIAA0355O15063 1070 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LYRM1O43325 122 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 GBAP04062 536 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LIMS3P0CW19 117 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LIMS4P0CW20 117 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CD53P19397 219 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 KELP23276 732 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 MTNR1AP48039 350 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 MAN2A2P49641 1150 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 RRAS2P62070 204 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TSPAN31Q12999 210 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 MAB21L1Q13394 359 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 SNAPC1Q16533 368 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CCDC58Q4VC31 144 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF648Q5T619 568 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 SLC27A4Q6P1M0 643 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TNFAIP8L2Q6P589 184 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CNIH2Q6PI25 160 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 DEF8Q6ZN54 512 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 GET4Q7L5D6 327 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 PDZD3Q86UT5 571 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 GHDCQ8N2G8 530 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 Q8N402 240 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 ATP6V1C2Q8NEY4 427 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TOR1AIP2Q8NFQ8 470 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 OR52P1PQ8NH57 321 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 FOXJ1Q92949 421 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 RAD51AP1Q96B01 352 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 DTD2Q96FN9 168 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 HYLS1Q96M11 299 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 PINK1Q9BXM7 581 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■■□ 20.8
C9orf3-204ENST00000424143 FOLH1BQ9HBA9 442 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 PAK6Q9NQU5 681 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 B3GNT2Q9NY97 397 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 BOLA1Q9Y3E2 137 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 ALG5Q9Y673 324 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 A0A0G2JPF8 293 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 HNRNPCL2B2RXH8 293 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 HNRNPCL3B7ZW38 293 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 SLC28A2O43868 658 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 BNIP3LO60238 219 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 B4GALT2O60909 372 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LILRB3O75022 631 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LEFTY1O75610 366 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 IGHA1P01876 353 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 EPHX1P07099 455 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CCNYL3P0C7X3 344 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 HNRNPCL4P0DMR1 293 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 ELNP15502 786 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 DDX6P26196 483 aaKnown RBP eCLIP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CCT3P49368 545 aaKnown RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 SHC2P98077 582 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 DAB2P98082 770 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CYP4F8P98187 520 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 FABP5Q01469 135 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 MXD1Q05195 221 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 HSD17B12Q53GQ0 312 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LHX8Q68G74 356 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TEX47Q8TBZ9 253 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 MOAP1Q96BY2 351 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 ZFYVE19Q96K21 471 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 AIF1LQ9BQI0 150 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TMEM121BQ9BXQ6 578 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TEX12Q9BXU0 123 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 BTBD1Q9H0C5 482 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 SPNS1Q9H2V7 528 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 C11orf49Q9H6J7 331 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 MVB12BQ9H7P6 319 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 PRM3Q9NNZ6 103 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 FAM8A1Q9UBU6 413 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 IL36AQ9UHA7 158 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 LIPT1Q9Y234 373 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 CDH10Q9Y6N8 788 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 RNF215Q9Y6U7 377 aa14.37□□□□□ -0.11
C9orf3-204ENST00000424143 TET1Q8NFU7 2136 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 FAM240BA0A1B0GVZ2 78 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 ERVH48-1M5A8F1 160 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 SAP18O00422 153 aaKnown RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 AKAP8O43823 692 aaKnown RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 VEGFDO43915 354 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 UBXN7O94888 489 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 PAPLNO95428 1278 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 TBX6O95947 436 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 XPAP23025 273 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms