RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 GPX6P59796 221 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 CALCOCO2Q13137 446 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 TMEM81Q6P7N7 255 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 Q71RC1 249 aaPredicted RBP15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 YRDCQ86U90 279 aaKnown RBP15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 KRTAP1-3Q8IUG1 177 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 PRR22Q8IZ63 422 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 PPM1NQ8N819 430 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 L3MBTL4Q8NA19 623 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 WDR20Q8TBZ3 569 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 TM9SF2Q99805 663 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 RBM24Q9BX46 236 aaKnown RBP15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 METTL7AQ9H8H3 244 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 ACOT9Q9Y305 439 aa15.37■□□□□ 0.05
UPF3AP3-201ENST00000420996 PPM1BO75688 479 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SEMA3DO95025 777 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 GFAPP14136 432 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 S1PR1P21453 382 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 GPX3P22352 226 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 GCKP35557 465 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SOX18P35713 384 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SLCO1A2P46721 670 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 XKP51811 444 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 NEK2P51955 445 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 ALDH18A1P54886 795 aaKnown RBP15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 NKX6-1P78426 367 aaPredicted RBP15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 FOXF2Q12947 444 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 GTF2H2Q13888 395 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 PCBP2Q15366 365 aaKnown RBP eCLIP15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 PFKFB4Q16877 469 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 C6orf163Q5TEZ5 329 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SHEQ5VZ18 495 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SLC30A6Q6NXT4 461 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 GTF2H2CQ6P1K8 395 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 ANGPTL8Q6UXH0 198 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 NUP54Q7Z3B4 507 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SMPDL3BQ92485 455 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SERPINI1Q99574 410 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 TUBA1CQ9BQE3 449 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 ERP44Q9BS26 406 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 SFXN3Q9BWM7 321 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 NXF5Q9H1B4 397 aaKnown RBP15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 DPH5Q9H2P9 285 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 IPPKQ9H8X2 491 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 RNF11Q9Y3C5 154 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 MED12Q93074 2177 aa15.36■□□□□ 0.05
UPF3AP3-201ENST00000420996 VPS13CQ709C8 3753 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 MED12LQ86YW9 2145 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 A0A087X1B8 175 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 A0A1B0GTL3 188 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 A0A1W2PPR1 153 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 SH3D21A4FU49 640 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 LRRC14BA6NHZ5 514 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 ICOSLGO75144 302 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 RCBTB2O95199 551 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 RHOXF2BP0C7M4 288 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 CPMP14384 443 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 PORP16435 677 aaPredicted RBP15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 NT5EP21589 574 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 PIK3CGP48736 1102 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 SNTA1Q13424 505 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 POU4F3Q15319 338 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 FAM83EQ2M2I3 478 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 CLEC9AQ6UXN8 241 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 GOLGA7Q7Z5G4 137 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 ADGRE4PQ86SQ3 457 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 CENPLQ8N0S6 344 aaPredicted RBP15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 KCTD4Q8WVF5 259 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 UCN2Q96RP3 112 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 OSBPL11Q9BXB4 747 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 GALNT8Q9NY28 637 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 RNF14Q9UBS8 474 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 ADAM29Q9UKF5 820 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 EXO1Q9UQ84 846 aaKnown RBP15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 CFL2Q9Y281 166 aa15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 TNPO3Q9Y5L0 923 aaKnown RBP15.35■□□□□ 0.05
UPF3AP3-201ENST00000420996 FAM187AA6NFU0 413 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 CASKO14936 926 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 SNPHO15079 494 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 ARHGEF9O43307 516 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 CPA2P48052 419 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 GNG11P61952 73 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 EEF1A1P68104 462 aaKnown RBP15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 NAB1Q13506 487 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 ACAP2Q15057 778 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 EEF1A1P5Q5VTE0 462 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 METTL2BQ6P1Q9 378 aaKnown RBP15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 SCIMPQ6UWF3 145 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 ENPP6Q6UWR7 440 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 LUZP2Q86TE4 346 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 CXorf67Q86X51 503 aaPredicted RBP15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 SLC44A1Q8WWI5 657 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 WNT2BQ93097 391 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 HGDQ93099 445 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 NODALQ96S42 347 aa15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 NAPGQ99747 312 aaPredicted RBP15.34■□□□□ 0.05
UPF3AP3-201ENST00000420996 OR2B2Q9GZK3 357 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms