RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PPP2R5CQ13362 524 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZKSCAN8Q15776 578 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 SMU1Q2TAY7 513 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 GPAT3Q53EU6 434 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 CCDC92Q53HC0 331 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 MS4A13Q5J8X5 152 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 C9orf129Q5T035 196 aaKnown RBP3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 TAF3Q5VWG9 929 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 LUZP1Q86V48 1076 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF525Q8N782 197 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 RDH11Q8TC12 318 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 ST7LQ8TDW4 575 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 C5orf30Q96GV9 206 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 ACCSQ96QU6 501 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 GPR174Q9BXC1 333 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 DCTPP1Q9H773 170 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 KCNMB3Q9NPA1 279 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 VNN3Q9NY84 501 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 NARFQ9UHQ1 456 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 CLEC4EQ9ULY5 219 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 KLF2Q9Y5W3 355 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 COL16A1Q07092 1604 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 FAM170AA1A519 330 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 P0C879 139 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 PGAM2P15259 253 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZBTB25P24278 435 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 CTNNA1P35221 906 aaKnown RBP3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 SAA4P35542 130 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 MAGEA9P43362 315 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 POU3F4P49335 361 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF131P52739 623 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 VCPP55072 806 aaKnown RBP3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 CD226Q15762 336 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 HAGHQ16775 308 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 PRAMEF7Q5VXH5 474 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 NKAIN2Q5VXU1 208 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 B3GLCTQ6Y288 498 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 UNC5CLQ8IV45 518 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 FBXO16Q8IX29 292 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 ATP6V1E2Q96A05 226 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 CPXM1Q96SM3 734 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 TIGARQ9NQ88 270 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 PLSCR3Q9NRY6 295 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 IMPAD1Q9NX62 359 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 TUBGCP4Q9UGJ1 667 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 SNX5Q9Y5X3 404 aa3.13□□□□□ -1.91
HMGB1P49-201ENST00000418882 EFCAB7A8K855 629 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 CYB561D2O14569 222 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 RANBP6O60518 1105 aaKnown RBP3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 LRP3O75074 770 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 GJB5O95377 273 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 PRAMEF12O95522 483 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 CXCL14O95715 111 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 KRT6AP02538 564 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 KRT6BP04259 564 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 PVRP15151 417 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 ACP1P24666 158 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 ACADSBP45954 432 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 KRT6CP48668 564 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 NLRP11P59045 1033 aaKnown RBP3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 PKN2Q16513 984 aaKnown RBP3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 MICAQ29983 383 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 PAN3Q58A45 887 aaKnown RBP3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 UBQLNLQ8IYU4 475 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 TMCO5AQ8N6Q1 288 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 OR4F17Q8NGA8 305 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 CFAP36Q96G28 342 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 OR4F4Q96R69 305 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 FAM173AQ9BQD7 235 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 ESM1Q9NQ30 184 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 CENPMQ9NSP4 180 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 PIGVQ9NUD9 493 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 RAI14Q9P0K7 980 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 NYAP2Q9P242 653 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 RNF115Q9Y4L5 304 aa3.12□□□□□ -1.91
HMGB1P49-201ENST00000418882 PTPRUQ92729 1446 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 CCDC69A6NI79 296 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 C19orf81C9J6K1 198 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 E7ENQ6 273 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 TLR4O00206 839 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 RTN2O75298 545 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 DUSP14O95147 198 aaKnown RBP3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 SFTPBP07988 381 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 ALPIP09923 528 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 IGFBP5P24593 272 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 CASP3P42574 277 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 OR1D4P47884 311 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 FNTAP49354 379 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 ARHGDIBP52566 201 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 SLC7A2P52569 658 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 BPIFB3P59826 476 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 LASP1Q14847 261 aaKnown RBP3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 CLPPQ16740 277 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 HFEQ30201 348 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF528Q3MIS6 628 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 DDI2Q5TDH0 399 aa3.11□□□□□ -1.91
HMGB1P49-201ENST00000418882 ASRGL1Q7L266 308 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms