RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TRIB3Q96RU7 358 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 DUSP23Q9BVJ7 150 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ABOP16442 354 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 MAGEA8P43361 318 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TUBA1BP68363 451 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TUBA4AP68366 448 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 PTGR1Q14914 329 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TUBA3EQ6PEY2 450 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 ZDHHC24Q6UX98 284 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 TUBA1AQ71U36 451 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 CEACAM19Q7Z692 300 aa10.7□□□□□ -0.7
PTCH1-205ENST00000418258 SOX30O94993 753 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 IFNA5P01569 189 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF888P0CJ79 500 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CXCL12P48061 93 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 OR10T2Q8NGX3 314 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 TAS2R1Q9NYW7 299 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 RNF6Q9Y252 685 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 NID2Q14112 1375 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 GKN3PP0CG01 181 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CD40LGP29965 261 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 MVKQ03426 396 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CES4AQ5XG92 561 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 AWAT2Q6E213 333 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 LEG1Q6P5S2 330 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 IGFN1Q86VF2 1251 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 C12orf43Q96C57 262 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SFXN2Q96NB2 322 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 PIP5K1AQ99755 562 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 TMEM185BQ9H7F4 350 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF395Q9H8N7 513 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 MOV10Q9HCE1 1003 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 A0A096LPI6 279 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 PRAMEF26H0Y7S4 382 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 RBBP9O75884 186 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 MAS1P04201 325 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CDH15P55291 814 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 TPTEP56180 551 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 MAB21L1Q13394 359 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SHQ1Q6PI26 577 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ABHD12BQ7Z5M8 362 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ARL5BQ96KC2 179 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 BMFQ96LC9 184 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 PLSCR5A0PG75 271 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 FAAHO00519 579 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SUOXP51687 545 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 POU4F2Q12837 409 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 PIGWQ7Z7B1 504 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SEC14L1Q92503 715 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 GIMAP2Q9UG22 337 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SETD1AO15047 1707 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 DRD2P14416 443 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CD70P32970 193 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 GCGRP47871 477 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 NTHL1P78549 312 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SPATS1Q496A3 300 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 NANOGP8Q6NSW7 305 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 MAMDC2Q7Z304 686 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 PHTF2Q8N3S3 785 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 NSUN5Q96P11 429 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CNN2Q99439 309 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 NANOGQ9H9S0 305 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 MAN2C1Q9NTJ4 1040 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SNED1Q8TER0 1413 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 GXYLT2A0PJZ3 443 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CD8B2A6NJW9 211 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CD8BP10966 210 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CKMT1AP12532 417 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 FADDQ13158 208 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF829Q3KNS6 432 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 UGT3A2Q3SY77 523 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 C3orf38Q5JPI3 329 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 ARHGAP11AQ6P4F7 1023 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 METTL2AQ96IZ6 378 aaKnown RBP10.69□□□□□ -0.7
PTCH1-205ENST00000418258 CAMK2AQ9UQM7 478 aa10.69□□□□□ -0.7
PTCH1-205ENST00000418258 SHOXO15266 292 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 CTHP32929 405 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 NPRL3Q12980 569 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 RTP2Q5QGT7 225 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 PLD6Q8N2A8 252 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 SECISBP2Q96T21 854 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 DNAJB11Q9UBS4 358 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 MAFKO60675 156 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 FAM205BPQ63HN1 556 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LARP4Q71RC2 724 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 SLAMF7Q9NQ25 335 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 SLC7A8Q9UHI5 535 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 NAALAD2Q9Y3Q0 740 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 B3GALT1Q9Y5Z6 326 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 ARSAP15289 507 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 NIPAL4Q0D2K0 466 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms