RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 IGHV5-51A0A0C4DH38 117 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 CHST10O43529 356 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 FGF17O60258 216 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 RDH16O75452 317 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 SLC35E2P0CK97 266 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 TNFRSF1BP20333 461 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 RYKP34925 604 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 GFERP55789 205 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 SMIM11AP58511 58 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 KEAP1Q14145 624 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 PUM1Q14671 1186 aaKnown RBP eCLIP15.74■□□□□ 0.11
SSBP3-205ENST00000417664 GRM7Q14831 915 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 FAM214AQ32MH5 1076 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 LIN52Q52LA3 116 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 GPAT3Q53EU6 434 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 HEPHL1Q6MZM0 1159 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 TSSK4Q6SA08 328 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 SLC35F3Q8IY50 421 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF595Q8IYB9 648 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 OFCC1Q8IZS5 231 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 SETD9Q8NE22 299 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 GPR32P1Q8NGA4 272 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 OR5T3Q8NGG3 340 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 C16orf58Q96GQ5 468 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 ING2Q9H160 280 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 KRT84Q9NSB2 600 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 NLGN3Q9NZ94 848 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 SLC9A8Q9Y2E8 581 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 TESMINQ9Y4I5 508 aa15.74■□□□□ 0.11
SSBP3-205ENST00000417664 A0A087WXM4 84 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 SMIM31A0A1B0GVY4 71 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 HYKKA2RU49 373 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 H0YIG0 161 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 SYT5O00445 386 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 YKT6O15498 198 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 FOXS1O43638 330 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 KIF1CO43896 1103 aaKnown RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 CLIC3O95833 236 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 RECKO95980 971 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 TFAP2AP05549 437 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 CHRM4P08173 479 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PABPC4LP0CB38 370 aaKnown RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 GIMD1P0DJR0 217 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PNLIPP16233 465 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 AVPR1BP47901 424 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 LIMS1P48059 325 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 TPD52P55327 224 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 FUT5Q11128 374 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 BNIP3Q12983 259 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 BIKQ13323 160 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 MICAQ29983 383 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 COLEC12Q5KU26 742 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 FHL5Q5TD97 284 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 C16orf62Q7Z3J2 963 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 KMT5CQ86Y97 462 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 OR4N5Q8IXE1 308 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 FKBP10Q96AY3 582 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 BARD1Q99728 777 aaKnown RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 YIPF4Q9BSR8 244 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PINK1Q9BXM7 581 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 SOX17Q9H6I2 414 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 ACER3Q9NUN7 267 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 TMEM74BQ9NUR3 256 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 ENOPH1Q9UHY7 261 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PILRBQ9UKJ0 227 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 DSPPQ9NZW4 1301 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 CACNA1IQ9P0X4 2223 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 TRIM64CA6NLI5 447 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 CLDN4O14493 209 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 LDB3O75112 727 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 GADD45GO95257 159 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 MSL3P1P0C860 447 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PTGER1P34995 402 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PIGAP37287 484 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 CDH12P55289 794 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 HSD11B2P80365 405 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 HPCAP84074 193 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PRICKLE4Q2TBC4 344 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 RBM48Q5RL73 367 aaKnown RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF691Q5VV52 312 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 WDR74Q6RFH5 385 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 FAM111BQ6SJ93 734 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 TMEM52Q8NDY8 209 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PHF10Q8WUB8 498 aaKnown RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 NR4A3Q92570 626 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 PMM1Q92871 262 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 ANKRD9Q96BM1 317 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 CTHRC1Q96CG8 243 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 GRIP2Q9C0E4 1043 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 EQTNQ9NQ60 294 aa15.73■□□□□ 0.11
SSBP3-205ENST00000417664 MN1Q10571 1320 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-205ENST00000417664 A0A0A6YYC8 382 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-205ENST00000417664 I3L1I5 382 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-205ENST00000417664 BCKDKO14874 412 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 CTNSO60931 367 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 SEC24DO94855 1032 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-205ENST00000417664 LGI1O95970 557 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 AK1P00568 194 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 LINGO3P0C6S8 592 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 NT5EP21589 574 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms