RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MEDAGQ5VYS4 303 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 KRT73Q86Y46 540 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 KIF18BQ86Y91 864 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 UBQLNLQ8IYU4 475 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 CAMKK1Q8N5S9 505 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 RGMAQ96B86 450 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 C1GALT1C1Q96EU7 318 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 NELL2Q99435 816 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 TRMT61BQ9BVS5 477 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 FBXW2Q9UKT8 454 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 KLHL20Q9Y2M5 609 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 MRPS23Q9Y3D9 190 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 N6AMT1Q9Y5N5 214 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 DOCK9Q9BZ29 2069 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 KIAA0355O15063 1070 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 VEGFDO43915 354 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 SEMA3DO95025 777 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 FRKP42685 505 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 FUT5Q11128 374 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 KRR1Q13601 381 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 C1DQ13901 141 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 ELAVL3Q14576 367 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 TCEA2Q15560 299 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 ATAD3CQ5T2N8 411 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 FAM131AQ6UXB0 335 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 C12orf76Q8N812 135 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 SLC35G5Q96KT7 338 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 EQTNQ9NQ60 294 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 DDX28Q9NUL7 540 aaKnown RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 CNIH4Q9P003 139 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 IL20RAQ9UHF4 553 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 MN1Q10571 1320 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-208ENST00000417496 HEATR5BQ9P2D3 2071 aa13.66□□□□□ -0.22
HDAC9-208ENST00000417496 A0A1W2PRQ8 180 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 CH25HO95992 272 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 CSF2P04141 144 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 HMGN2P05204 90 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 KRT8P05787 483 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 RB1P06400 928 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 ENDOUP21128 410 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 RPS25P62851 125 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 CSNK1G2P78368 415 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 MLLT11Q13015 90 aaPredicted RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 GPR50Q13585 617 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 OCLNQ16625 522 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 FAM46CQ5VWP2 391 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 OR4C11Q6IEV9 310 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 ERN2Q76MJ5 926 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 FAM26EQ8N5C1 309 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 OR8K5Q8NH50 307 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 CXorf40AQ8TE69 158 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 SRRQ9GZT4 340 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 GPR55Q9Y2T6 319 aaPredicted RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 WASP42768 502 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 INSL4Q14641 139 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 METRNLQ641Q3 311 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 ZNF517Q6ZMY9 492 aaPredicted RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 MORN4Q8NDC4 146 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 TMIEQ8NEW7 156 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 SLC25A46Q96AG3 418 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 FERD3LQ96RJ6 166 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 MYO10Q9HD67 2058 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 WASH6PQ9NQA3 447 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 SLC35C2Q9NQQ7 365 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 MBNL1Q9NR56 388 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 IMP3Q9NV31 184 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 PLEKHB1Q9UF11 243 aaPredicted RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 TESQ9UGI8 421 aaKnown RBP13.65□□□□□ -0.22
HDAC9-208ENST00000417496 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 TRAPPC4Q9Y296 219 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 ATG4BQ9Y4P1 393 aa13.65□□□□□ -0.22
HDAC9-208ENST00000417496 ACP5P13686 325 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 CTNNB1P35222 781 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 CDK3Q00526 305 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 REEP5Q00765 189 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 WSCD2Q2TBF2 565 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 CCDC92Q53HC0 331 aaPredicted RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 TMEM107Q6UX40 140 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF765Q7L2R6 523 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 ABI3BPQ7Z7G0 1075 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 LHFPL3Q86UP9 236 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 LRRTM4Q86VH4 590 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 ETFBKMTQ8IXQ9 262 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 CREB3L4Q8TEY5 395 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 DIRAS2Q96HU8 199 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 DCLRE1CQ96SD1 692 aaKnown RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 YIPF2Q9BWQ6 316 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 BEX2Q9BXY8 128 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms