RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ANKRD9Q96BM1 317 aaPredicted RBP16.61■□□□□ 0.25
VCP-202ENST00000417448 TRIM45Q9H8W5 580 aaPredicted RBP16.61■□□□□ 0.25
VCP-202ENST00000417448 AHSPQ9NZD4 102 aa16.61■□□□□ 0.25
VCP-202ENST00000417448 TCRBV16S1A1N1A0A5B0 115 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 CLDN4O14493 209 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 FGF17O60258 216 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 CTNSO60931 367 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 SKAP2O75563 359 aaPredicted RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 PDE9AO76083 593 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 HSPA4LO95757 839 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 AIFM1O95831 613 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 SERPINE1P05121 402 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 HEXAP06865 529 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 ADSLP30566 484 aaPredicted RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 ABCE1P61221 599 aaKnown RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 NAA20P61599 178 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 TNFRSF17Q02223 184 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 IMPG1Q17R60 797 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 ZNF750Q32MQ0 723 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 UGT3A2Q3SY77 523 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 KANK2Q63ZY3 851 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 FAM180BQ6P0A1 224 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 PAMR1Q6UXH9 720 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 CXXC5Q7LFL8 322 aaKnown RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 RPS19BP1Q86WX3 136 aaKnown RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 LIX1LQ8IVB5 337 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 SULF2Q8IWU5 870 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 DDIASQ8IXT1 998 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 ZNF595Q8IYB9 648 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 POGLUT1Q8NBL1 392 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 OR52N2Q8NGI0 321 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 SPATA3Q8NHX4 192 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 ELP5Q8TE02 316 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 PPP1R36Q96LQ0 422 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 SH3GL2Q99962 352 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 TRMOQ9BU70 441 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 ALOXE3Q9BYJ1 711 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 LYARQ9NX58 379 aaKnown RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 MRPS33Q9Y291 106 aaKnown RBP16.6■□□□□ 0.25
VCP-202ENST00000417448 DNAJC15Q9Y5T4 150 aa16.6■□□□□ 0.25
VCP-202ENST00000417448 IFNA16P05015 189 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 HSD3B1P14060 373 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 HSD3B2P26439 372 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 SLC1A6P48664 564 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 CYB561P49447 251 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 MAPK12P53778 367 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 HSD17B7P56937 341 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 SLC26A5P58743 744 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 STX4Q12846 297 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 C10orf62Q5T681 223 aaPredicted RBP16.59■□□□□ 0.25
VCP-202ENST00000417448 ARHGAP11AQ6P4F7 1023 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 ARSKQ6UWY0 536 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 DGAT2L6Q6ZPD8 337 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 ACAD11Q709F0 780 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 ZNF781Q8N8C0 355 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 GBP7Q8N8V2 638 aaPredicted RBP16.59■□□□□ 0.25
VCP-202ENST00000417448 C16orf52Q8NHV5 167 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 CDC26Q8NHZ8 85 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 TWIST2Q8WVJ9 160 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 TM4SF18Q96CE8 201 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 SORT1Q99523 831 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 RPF2Q9H7B2 306 aaKnown RBP16.59■□□□□ 0.25
VCP-202ENST00000417448 VIPAS39Q9H9C1 493 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 EML4Q9HC35 981 aaKnown RBP16.59■□□□□ 0.25
VCP-202ENST00000417448 NMRK1Q9NWW6 199 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 NKIRAS1Q9NYS0 192 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 PHF11Q9UIL8 331 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 MMACHCQ9Y4U1 282 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 CCL27Q9Y4X3 112 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
VCP-202ENST00000417448 SPACA6W5XKT8 324 aa16.59■□□□□ 0.25
VCP-202ENST00000417448 MPDZO75970 2070 aa16.58■□□□□ 0.25
VCP-202ENST00000417448 PIP5K1BO14986 540 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 PCDH7O60245 1069 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 JUNP05412 331 aaKnown RBP16.58■□□□□ 0.24
VCP-202ENST00000417448 NR2F6P10588 404 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 HOXC12P31275 282 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 ARFIP1P53367 373 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 TAS2R50P59544 299 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 ACSM2AQ08AH3 577 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 BST1Q10588 318 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 STX3Q13277 289 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 DEFB113Q30KQ7 82 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 ACSM2BQ68CK6 577 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 Q6ZSR9 355 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 PAGE2Q7Z2X7 111 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 TRIM46Q7Z4K8 759 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 CAMKMTQ7Z624 323 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 OR5M3Q8NGP4 307 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 NUDT8Q8WV74 236 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 C3orf30Q96M34 536 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 LPAR4Q99677 370 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 PNPOQ9NVS9 261 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 CRIM1Q9NZV1 1036 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 HEY2Q9UBP5 337 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 EML6Q6ZMW3 1958 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 NBEAL1Q6ZS30 2694 aa16.58■□□□□ 0.24
VCP-202ENST00000417448 MXRA5Q9NR99 2828 aa16.57■□□□□ 0.24
VCP-202ENST00000417448 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms