RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 LMNTD1Q8N9Z9 388 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 VPS37AQ8NEZ2 397 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 OR52P1PQ8NH57 321 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 TMEM163Q8TC26 289 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 C1GALT1C1Q96EU7 318 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 KCNJ15Q99712 375 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 TSSK6Q9BXA6 273 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 MED28Q9H204 178 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 IL36AQ9UHA7 158 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 NCKAP1Q9Y2A7 1128 aa13.1□□□□□ -0.31
CHEK2-210ENST00000416671 SPIN1Q9Y657 262 aaPredicted RBP13.1□□□□□ -0.31
CHEK2-210ENST00000416671 EPOPA6NHQ4 379 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 WASH3PC4AMC7 463 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 NNMTP40261 264 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CAV3P56539 151 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 SRP54P61011 504 aaKnown RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 GAB1Q13480 694 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 DDX39BQ13838 428 aaKnown RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 KCNC3Q14003 757 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 GRK1Q15835 563 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 COL28A1Q2UY09 1125 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 FRG2Q64ET8 278 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 ZNF57Q68EA5 555 aaPredicted RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 TYW3Q6IPR3 259 aaKnown RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 SFTPA1Q8IWL2 248 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 GEMIN6Q8WXD5 167 aaKnown RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 FCRL1Q96LA6 429 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 FRG2BQ96QU4 278 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 PRM3Q9NNZ6 103 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 BTNL2Q9UIR0 455 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 DSPPQ9NZW4 1301 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 ARRDC5A6NEK1 342 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 SGK494L7N484 410 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 KPNA3O00505 521 aaPredicted RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CHP2O43745 196 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 C8GP07360 202 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 PTBP1P26599 531 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■■■■ 29.2
CHEK2-210ENST00000416671 GSTM5P46439 218 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 SLC6A12P48065 614 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CASP9P55211 416 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 PFN3P60673 137 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 BTG1P62324 171 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CHIT1Q13231 466 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 DHCR24Q15392 516 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 FCN2Q15485 313 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 LEXMQ3ZCV2 418 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 PLK5Q496M5 336 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CRTC2Q53ET0 693 aaPredicted RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 HENMT1Q5T8I9 393 aaKnown RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CPTPQ5TA50 214 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 ADNP2Q6IQ32 1131 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 CASP12Q6UXS9 341 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 LRRC70Q7Z2Q7 622 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 NPAS3Q8IXF0 933 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 RASGEF1AQ8N9B8 481 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.09□□□□□ -0.311e-16■■■■■ 49.3
CHEK2-210ENST00000416671 MED8Q96G25 268 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 SLC6A18Q96N87 628 aa13.09□□□□□ -0.31
CHEK2-210ENST00000416671 YARS2Q9Y2Z4 477 aaKnown RBP13.09□□□□□ -0.31
CHEK2-210ENST00000416671 GFYI3L273 518 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 QSOX1O00391 747 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 SCAMP2O15127 329 aaKnown RBP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 PSIP1O75475 530 aaKnown RBP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 ETFAP13804 333 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 CD22P20273 847 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 PDHA2P29803 388 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 BDKRB1P46663 353 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 EVX1P49640 407 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 SCARB2Q14108 478 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 L3MBTL4Q8NA19 623 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 RSPRY1Q96DX4 576 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 TOE1Q96GM8 510 aaKnown RBP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 MTERF1Q99551 399 aaKnown RBP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 TM9SF2Q99805 663 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 WACQ9BTA9 647 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 PPA2Q9H2U2 334 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 NT5DC2Q9H857 520 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 HEXA-AS1Q9H8Q6 139 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 ZFP64Q9NPA5 681 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 RHCGQ9UBD6 479 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 GSTK1Q9Y2Q3 226 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 A0A0A6YYJ9 748 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 GABRR3A8MPY1 467 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 ARHGEF33A8MVX0 844 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 SLC30A4O14863 429 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 LZTS3O60299 673 aaPredicted RBP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 IFNA7P01567 189 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 ELFN1P0C7U0 828 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 PRKACAP17612 351 aa13.08□□□□□ -0.32
CHEK2-210ENST00000416671 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHEK2-210ENST00000416671 DGKGP49619 791 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms