RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 IMP3Q9NV31 184 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 LYARQ9NX58 379 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR6C2Q9NZP2 312 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 GPR52Q9Y2T5 361 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 PCDHB9Q9Y5E1 797 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 GPR171O14626 319 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 POU3F2P20265 443 aaPredicted RBP13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 LCN1P31025 176 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 CACNG1Q06432 222 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 TAF10Q12962 218 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 C10orf120Q5SQS8 335 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 ALKAL2Q6UX46 152 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 QSOX2Q6ZRP7 698 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 MEX3DQ86XN8 651 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 SMG7Q92540 1137 aaKnown RBP13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 PTP4A1Q93096 173 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 FBXO32Q969P5 355 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 SCMH1Q96GD3 660 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 CASD1Q96PB1 797 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 DPAGT1Q9H3H5 408 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 FANCFQ9NPI8 374 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 HPF1Q9NWY4 346 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 TAS2R7Q9NYW3 318 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 ACSL5Q9ULC5 683 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 PCDHB1Q9Y5F3 818 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 ENPP4Q9Y6X5 453 aa13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
NCKIPSD-204ENST00000416649 GLYATL1P3A0A0U1RQE8 302 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 DVL2O14641 736 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 TNFRSF10BO14763 440 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 MMP20O60882 483 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 C1SP09871 688 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 F8A1P23610 371 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 ARHGDIBP52566 201 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 SNRPGP62308 76 aaKnown RBP13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 CDK6Q00534 326 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 CHIT1Q13231 466 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 SEC23BQ15437 767 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 METAP1DQ6UB28 335 aaPredicted RBP13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 DEF8Q6ZN54 512 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 PIGKQ92643 395 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 SFXN2Q96NB2 322 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 SLC35A5Q9BS91 424 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 REV1Q9UBZ9 1251 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 FBXL2Q9UKC9 423 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 CHURC1-FNTBB4DL54 471 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 FZD6O60353 706 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 TCRBP04435 133 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 CD3GP09693 182 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 TFPIP10646 304 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 IRF1P10914 325 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 GKP32189 559 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 VIPR1P32241 457 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 GPR85P60893 370 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 GRIN2CQ14957 1233 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 HSD17B12Q53GQ0 312 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 FAM180BQ6P0A1 224 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 ATRAIDQ6UW56 229 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 LYPD4Q6UWN0 246 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 MSANTD1Q6ZTZ1 278 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 LINC00469Q8N7U9 141 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 SAMD12Q8N8I0 201 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 BMPERQ8N8U9 685 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR8J2Q8NGG1 315 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 SLC5A11Q8WWX8 675 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 UROC1Q96N76 676 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 DDOQ99489 341 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 MGME1Q9BQP7 344 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 MED18Q9BUE0 208 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 PRR14Q9BWN1 585 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 CHST8Q9H2A9 424 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 FZD3Q9NPG1 666 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 DLL4Q9NR61 685 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 GPATCH2Q9NW75 528 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 MARCH5Q9NX47 278 aa13.93□□□□□ -0.18
NCKIPSD-204ENST00000416649 ALDOBP05062 364 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ANXA4P09525 319 aaPredicted RBP13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CCL5P13501 91 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ELOAQ14241 798 aaKnown RBP13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 OPCMLQ14982 345 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ST3GAL2Q16842 350 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CD276Q5ZPR3 534 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ADNP2Q6IQ32 1131 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CXorf57Q6NSI4 855 aaKnown RBP13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR2T4Q8NH00 348 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 GIMAP1Q8WWP7 306 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ART5Q96L15 291 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 C12orf57Q99622 126 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CACNG6Q9BXT2 260 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 SLC6A17Q9H1V8 727 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 SEMA3GQ9NS98 782 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZFR2Q9UPR6 939 aaKnown RBP13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 DOCK4Q8N1I0 1966 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CD9P21926 228 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR1D2P34982 312 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 HBA1P69905 142 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 C3P1Q6ZMU1 363 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms