RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CDH16O75309 829 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 ULK1O75385 1050 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 GPX3P22352 226 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 GDF1P27539 372 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 MSX1P28360 303 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 HMOX2P30519 316 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 FEN1P39748 380 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 CASP3P42574 277 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 MGAT2Q10469 447 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 CSTF3Q12996 717 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 FAM111BQ6SJ93 734 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 GPRIN3Q6ZVF9 776 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 PACS2Q86VP3 889 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 KLHL29Q96CT2 875 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 HSPBAP1Q96EW2 488 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 RILPQ96NA2 401 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 NXF5Q9H1B4 397 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 SLC6A15Q9H2J7 730 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 NPDC1Q9NQX5 325 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 MAT2BQ9NZL9 334 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 FETUBQ9UGM5 382 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 BCAP29Q9UHQ4 241 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 ZNF639Q9UID6 485 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 MCM8Q9UJA3 840 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 ZNF780BQ9Y6R6 833 aa16.13■□□□□ 0.17
PDLIM2-208ENST00000416159 A0A0G2JNJ9 132 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 ESRRBO95718 433 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 ABCB1P08183 1280 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 GSTA1P08263 222 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 ABCD3P28288 659 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 MASP1P48740 699 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 TRPC1P48995 793 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 ALDH9A1P49189 494 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 PRKAA2P54646 552 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 RIPPLY2Q5TAB7 128 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 BICRALQ6AI39 1079 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 DMRTC2Q8IXT2 367 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 PRR22Q8IZ63 422 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 CLYBLQ8N0X4 340 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 MMP21Q8N119 569 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 GBP7Q8N8V2 638 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 METTL6Q8TCB7 284 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 CTHRC1Q96CG8 243 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 LCORQ96JN0 433 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 TMEM237Q96Q45 408 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 HBEGFQ99075 208 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 SLC24A3Q9HC58 644 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 PSMC3IPQ9P2W1 217 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 PRODH2Q9UF12 536 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 Q9UFV3 132 aa16.12■□□□□ 0.17
PDLIM2-208ENST00000416159 ARHGAP21Q5T5U3 1957 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 CCDC151A5D8V7 595 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 AHRRA9YTQ3 701 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 ACOX3O15254 700 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 PPM1BO75688 479 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 TRAPPC6AO75865 159 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 HPNP05981 417 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 DRD2P14416 443 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 PKNOX1P55347 436 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 DCAF7P61962 342 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 DUSP8Q13202 625 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 SLC29A2Q14542 456 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 SLC25A35Q3KQZ1 300 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 TCHHL1Q5QJ38 904 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 NUP54Q7Z3B4 507 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 ULK2Q8IYT8 1036 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 ADCY4Q8NFM4 1077 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 L3HYPDHQ96EM0 354 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 CNRIP1Q96F85 164 aaPredicted RBP16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 TMEM41AQ96HV5 264 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 ZNF681Q96N22 645 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 UBQLN3Q9H347 655 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 DCDC2Q9UHG0 476 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 UTS2RQ9UKP6 389 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 DTX4Q9Y2E6 619 aa16.11■□□□□ 0.17
PDLIM2-208ENST00000416159 EXPH5Q8NEV8 1989 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 C15orf38-AP3S2A0A0A6YYH1 394 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 GOLGA8RI6L899 631 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 BCAS2O75934 225 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 CBX7O95931 251 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 ENO1P06733 434 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 FAM153BP0C7A2 387 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 PYGBP11216 843 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 CHN1P15882 459 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 ADH7P40394 386 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 PPICP45877 212 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 CDK9P50750 372 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 KRTAP10-9P60411 292 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 LCP2Q13094 533 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 EXOSC7Q15024 291 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 SF3B4Q15427 424 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 FAM153CQ494X1 144 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 TRMT12Q53H54 448 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 SPIN4Q56A73 249 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 FNDC7Q5VTL7 733 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 SLC30A6Q6NXT4 461 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 TMEM81Q6P7N7 255 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 SAMD14Q8IZD0 417 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 OR52R1Q8NGF1 315 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms