RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NRTNQ99748 197 aa9.26□□□□□ -0.93
CD44-206ENST00000415148 FNDC11Q9BVV2 318 aa9.26□□□□□ -0.93
CD44-206ENST00000415148 WASH6PQ9NQA3 447 aa9.26□□□□□ -0.93
CD44-206ENST00000415148 ACOXLQ9NUZ1 547 aa9.26□□□□□ -0.93
CD44-206ENST00000415148 A0A1W2PQL4 384 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 PRKYO43930 277 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 TBX6O95947 436 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 PRNPP04156 253 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 ALPPP05187 535 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 ACP2P11117 423 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 MYL12AP19105 171 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 MYL9P24844 172 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 WEE1P30291 646 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 FGF9P31371 208 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 HTR2BP41595 481 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 CCR2P41597 374 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 GPR1P46091 355 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 NOGQ13253 232 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 COL9A2Q14055 689 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 GNA13Q14344 377 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 GINS1Q14691 196 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 ARHGAP15Q53QZ3 475 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 PDZK1Q5T2W1 519 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 PODNL1Q6PEZ8 512 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 MRGPREQ86SM8 312 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 PLA2G15Q8NCC3 412 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 JPH3Q8WXH2 748 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 NUS1Q96E22 293 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 ZNF582Q96NG8 517 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 TREX2Q9BQ50 279 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 IRF2BPLQ9H1B7 796 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 OR52A5Q9H2C5 316 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 BCL2L10Q9HD36 194 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 NDRG2Q9UN36 371 aaKnown RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 SLC9A8Q9Y2E8 581 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 GSTK1Q9Y2Q3 226 aa9.25□□□□□ -0.93
CD44-206ENST00000415148 NUP210Q8TEM1 1887 aaPredicted RBP9.25□□□□□ -0.93
CD44-206ENST00000415148 MEN1O00255 615 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 KIAA0355O15063 1070 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SLC28A2O43868 658 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 B4GALT2O60909 372 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 RPN2P04844 631 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ADH1AP07327 375 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TSPAN19P0C672 248 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 DRD2P14416 443 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TNNI3P19429 210 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 APEX1P27695 318 aaKnown RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 HLA-DMAP28067 261 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 PPP2R1BP30154 601 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ETV5P41161 510 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ETV1P50549 477 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ANXA11P50995 505 aaKnown RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 ZNF77Q15935 545 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 CEP78Q5JTW2 689 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 OR2G6Q5TZ20 316 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SYCE2Q6PIF2 218 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 METAP1DQ6UB28 335 aaPredicted RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 FAM83HQ6ZRV2 1179 aaPredicted RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 RTL10Q7L3V2 364 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 PDZD3Q86UT5 571 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ZNF547Q8IVP9 402 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 DCUN1D3Q8IWE4 304 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 YIPF7Q8N8F6 280 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ZFP41Q8N8Y5 198 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 BBS10Q8TAM1 723 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 WFIKKN2Q8TEU8 576 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SORCS1Q8WY21 1168 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 RAB8BQ92930 207 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 RGMAQ96B86 450 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 CITED4Q96RK1 184 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 COQ7Q99807 217 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SLA2Q9H6Q3 261 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 MVB12BQ9H7P6 319 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TRPV5Q9NQA5 729 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 EXOSC1Q9Y3B2 195 aaKnown RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 SF3B6Q9Y3B4 125 aaKnown RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 KIAA1549LQ6ZVL6 1849 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 C5orf42Q9H799 3197 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 A0A0C4DFX4 3053 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 OR6C70A6NIJ9 312 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SLC30A4O14863 429 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 POLR1CO15160 346 aaPredicted RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 PRODHO43272 600 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 NTN1O95631 604 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 MMP11P24347 488 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SDC2P34741 201 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 IFNGR2P38484 337 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 MAN2A2P49641 1150 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 CCR8P51685 355 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 GAS1P54826 345 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 RPS25P62851 125 aaKnown RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 HSPB3Q12988 150 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 PIN1Q13526 163 aaPredicted RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 NFE2L1Q14494 772 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 INSL4Q14641 139 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 P2RY14Q15391 338 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ZNF628Q5EBL2 1059 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 PRAMEF8Q5VWM4 474 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 PRAMEF7Q5VXH5 474 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms