RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CPEP16870 476 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 XPAP23025 273 aaPredicted RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 GAS1P54826 345 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 TRIM69Q86WT6 500 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 OR8H1Q8NGG4 311 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 MCOLN1Q9GZU1 580 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 HDHD2Q9H0R4 259 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 STARD7Q9NQZ5 370 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 KCNE3Q9Y6H6 103 aa13.78□□□□□ -0.2
SEMA3F-202ENST00000413852 PEPDP12955 493 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 MYL12AP19105 171 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 MLLT3P42568 568 aaPredicted RBP13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 TAP2Q03519 686 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 PDE7AQ13946 482 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 FIBINQ8TAL6 211 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 PDXPQ96GD0 296 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 PPP1R3EQ9H7J1 279 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 MAN2C1Q9NTJ4 1040 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC5A10A0PJK1 596 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ABLIM3O94929 683 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 IL1AP01583 271 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 LIMS3P0CW19 117 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 LIMS4P0CW20 117 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 C8orf89P0DMQ9 161 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 WNT4P56705 351 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ABATP80404 500 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 PRICKLE2Q7Z3G6 844 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM181AQ8N9Y4 354 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 MS4A3Q96HJ5 214 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 IGSF21Q96ID5 467 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 COQ7Q99807 217 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ATF6BQ99941 703 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 RETREG1Q9H6L5 497 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 TESQ9UGI8 421 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 A0A1W2PQ45 241 aaPredicted RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 A0A1W2PQY0 241 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 POP4O95707 220 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ARSBP15848 533 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 TIMP2P16035 220 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 FUT1P19526 365 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 IRS1P35568 1242 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 STXBP1P61764 594 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 TEKQ02763 1124 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF284Q2VY69 593 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 BCL2L15Q5TBC7 163 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 GDPD1Q8N9F7 314 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 PCSK9Q8NBP7 692 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 OR5AR1Q8NGP9 310 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 NACC2Q96BF6 587 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 AP2M1Q96CW1 435 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 TTTY10Q9BZA0 68 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 CLCA2Q9UQC9 943 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 GPR55Q9Y2T6 319 aaPredicted RBP13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 INSL5Q9Y5Q6 135 aa13.77□□□□□ -0.21
SEMA3F-202ENST00000413852 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 FABP7O15540 132 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 ATG13O75143 517 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 UQCRC2P22695 453 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 INPP1P49441 399 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 FCN2Q15485 313 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 MEDAGQ5VYS4 303 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 RNF180Q86T96 592 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 NATD1Q8N6N6 113 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 BEST4Q8NFU0 473 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM46AQ96IP4 442 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 PPIL3Q9H2H8 161 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 LSM7Q9UK45 103 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 DIMT1Q9UNQ2 313 aaKnown RBP13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 MGAT4BQ9UQ53 548 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 A8MUA0 341 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 LEFTY2O00292 366 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 HSD3B1P14060 373 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 ELK1P19419 428 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 HSD3B2P26439 372 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 SSTR2P30874 369 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 NNMTP40261 264 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 MAPK8P45983 427 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 PLK5Q496M5 336 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 WDR45BQ5MNZ6 344 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 VN1R2Q8NFZ6 395 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 RNF32Q9H0A6 362 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 SAP130Q9H0E3 1048 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 OR51I1Q9H343 314 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 MED20Q9H944 212 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 EQTNQ9NQ60 294 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 SIRT3Q9NTG7 399 aaPredicted RBP13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 KLHL42Q9P2K6 505 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms