RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 HIVEP2P31629 2446 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 A8MXE2 369 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 SUPT3HB4E1H0 165 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 GNB5O14775 395 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 UGDHO60701 494 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 ERN1O75460 977 aaKnown RBP11.06□□□□□ -0.64
LIMS2-210ENST00000413578 SUPT3HO75486 399 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 PPM1BO75688 479 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 TNFSF13O75888 250 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 TCP1P17987 556 aaKnown RBP11.06□□□□□ -0.64
LIMS2-210ENST00000413578 PCYT1AP49585 367 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 GFRA1P56159 465 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 NRG3P56975 720 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 RPP38P78345 283 aaKnown RBP11.06□□□□□ -0.64
LIMS2-210ENST00000413578 MGAT2Q10469 447 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 RCAN2Q14206 197 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 Q5PR19 223 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 CMC1Q7Z7K0 106 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 LUZP2Q86TE4 346 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 NUDT13Q86X67 352 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 TEX9Q8N6V9 391 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 L3MBTL4Q8NA19 623 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 OR1J4Q8NGS1 313 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 CDKL2Q92772 493 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 WNT2BQ93097 391 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 NODALQ96S42 347 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 TRIM31Q9BZY9 425 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 ZNF395Q9H8N7 513 aaPredicted RBP11.06□□□□□ -0.64
LIMS2-210ENST00000413578 NMRAL1Q9HBL8 299 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
LIMS2-210ENST00000413578 EFCAB8A8MWE9 144 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 DEFB108AA8MXU0 73 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 FOXE1O00358 373 aaPredicted RBP11.05□□□□□ -0.64
LIMS2-210ENST00000413578 ARHGEF9O43307 516 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 ICOSLGO75144 302 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 SEMA3DO95025 777 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 GBAP04062 536 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 RHOXF2BP0C7M4 288 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 CYP4B1P13584 511 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 CPMP14384 443 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 GPX6P59796 221 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 SNTA1Q13424 505 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 SETDB1Q15047 1291 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 HLA-DQA1Q5Y7H0 255 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 SLC30A6Q6NXT4 461 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 PRSS57Q6UWY2 283 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 PLXDC2Q6UX71 529 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 ANGPTL8Q6UXH0 198 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 TAOK1Q7L7X3 1001 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 CENPLQ8N0S6 344 aaPredicted RBP11.05□□□□□ -0.64
LIMS2-210ENST00000413578 WDSUB1Q8N9V3 476 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 OR7G1Q8NGA0 311 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 RHEBL1Q8TAI7 183 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 PYROXD1Q8WU10 500 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 NUDT8Q8WV74 236 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 INTS12Q96CB8 462 aaKnown RBP11.05□□□□□ -0.64
LIMS2-210ENST00000413578 TM9SF2Q99805 663 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 PIGMQ9H3S5 423 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 WDR41Q9HAD4 459 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 ZNF639Q9UID6 485 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 CES1P1Q9UKY3 287 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 EXO1Q9UQ84 846 aaKnown RBP11.05□□□□□ -0.64
LIMS2-210ENST00000413578 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 FREM3P0C091 2139 aa11.05□□□□□ -0.64
LIMS2-210ENST00000413578 ARID1AO14497 2285 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 LRRC14BA6NHZ5 514 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 H7C1Q1 480 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 EIF3HO15372 352 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIMS2-210ENST00000413578 CTIFO43310 598 aaKnown RBP11.04□□□□□ -0.64
LIMS2-210ENST00000413578 HCRTR2O43614 444 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 CBR3O75828 277 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 LTA4HP09960 611 aaKnown RBP11.04□□□□□ -0.64
LIMS2-210ENST00000413578 SPRP35270 261 aaPredicted RBP11.04□□□□□ -0.64
LIMS2-210ENST00000413578 LHX2P50458 406 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 XKP51811 444 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 NEK2P51955 445 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 CLDN18P56856 261 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 TOMM20Q15388 145 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 PRICKLE4Q2TBC4 344 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 GRTP1Q5TC63 336 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 CYP20A1Q6UW02 462 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 MYLK4Q86YV6 388 aaPredicted RBP11.04□□□□□ -0.64
LIMS2-210ENST00000413578 TRIM42Q8IWZ5 723 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 GCNT2Q8N0V5 402 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 VWA5B2Q8N398 1253 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 SIMC1Q8NDZ2 872 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 OR4K14Q8NGD5 310 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 PPP1R14CQ8TAE6 165 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 NXNL1Q96CM4 212 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 REPS1Q96D71 796 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 MARK4Q96L34 752 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 OSBPL11Q9BXB4 747 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 ITPAQ9BY32 194 aa11.04□□□□□ -0.64
LIMS2-210ENST00000413578 ACBD3Q9H3P7 528 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms