RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FOXA2Q9Y261 457 aaPredicted RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 PLEKHA6Q9Y2H5 1048 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 CFAP65Q6ZU64 1925 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 SFTPBP07988 381 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 IDSP22304 550 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 HLCSP50747 726 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 NME5P56597 212 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 SLMAPQ14BN4 828 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 EXOSC7Q15024 291 aaKnown RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 GLRA4Q5JXX5 417 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 MFSD7Q6UXD7 560 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 PRSS42Q7Z5A4 293 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 FAF2Q96CS3 445 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 FUT8Q9BYC5 575 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 NRN1Q9NPD7 142 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 KLRF1Q9NZS2 232 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 ADAM22Q9P0K1 906 aa2.88□□□□□ -1.95
PMS1-203ENST00000409593 ZFP37Q9Y6Q3 630 aaPredicted RBP2.88□□□□□ -1.95
PMS1-203ENST00000409593 ATP6V1G1O75348 118 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 LYPD3O95274 346 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 P0C879 139 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 MGMTP16455 207 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 IL2RGP31785 369 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 CD47Q08722 323 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 SERTAD2Q14140 314 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 ISXQ2M1V0 245 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 HKDC1Q2TB90 917 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 GPAT3Q53EU6 434 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 STOX1Q6ZVD7 989 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 UNC5CLQ8IV45 518 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 NAT8LQ8N9F0 302 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 RFESDQ8TAC1 157 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 VSIG2Q96IQ7 327 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 SLC5A7Q9GZV3 580 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 PLSCR3Q9NRY6 295 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 CENPMQ9NSP4 180 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 ERVK-18Q9QC07 812 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 NARFQ9UHQ1 456 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 ABCG2Q9UNQ0 655 aa2.87□□□□□ -1.95
PMS1-203ENST00000409593 A0A1W2PRQ8 180 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 EEF2KO00418 725 aaKnown RBP2.86□□□□□ -1.95
PMS1-203ENST00000409593 PDE5AO76074 875 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 WNT2P09544 360 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 CD1EP15812 388 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 ZNF131P52739 623 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 VCPP55072 806 aaKnown RBP2.86□□□□□ -1.95
PMS1-203ENST00000409593 ZNF33BQ06732 778 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 ASAH1Q13510 395 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 CAPRIN1Q14444 709 aaKnown RBP2.86□□□□□ -1.95
PMS1-203ENST00000409593 EPC2Q52LR7 807 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 ZNF544Q6NX49 715 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 TMEM270Q6UE05 265 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 TMCO5AQ8N6Q1 288 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 TSPYL1Q9H0U9 437 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 MIEF1Q9NQG6 463 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 VPS54Q9P1Q0 977 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 MAD2L2Q9UI95 211 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 KLHL21Q9UJP4 597 aa2.86□□□□□ -1.95
PMS1-203ENST00000409593 SLC28A1O00337 649 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 EI24O14681 340 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 ALPIP09923 528 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 UGT1A6P19224 532 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 ACP1P24666 158 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 PTPN4P29074 926 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 SAA4P35542 130 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 STX17P56962 302 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 B3GLCTQ6Y288 498 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 ERICH1Q86X53 443 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 APOBEC3FQ8IUX4 373 aaKnown RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 PYROXD2Q8N2H3 581 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 LPCAT1Q8NF37 534 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 LINC01006Q8NI28 216 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 ZNF564Q8TBZ8 553 aaPredicted RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 RNASE8Q8TDE3 154 aaKnown RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 RAB39BQ96DA2 213 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 C9orf85Q96MD7 179 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 CPXM1Q96SM3 734 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 IL1RAPL2Q9NP60 686 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 NTNG1Q9Y2I2 539 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 RNF115Q9Y4L5 304 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 KLF2Q9Y5W3 355 aaPredicted RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 SNX5Q9Y5X3 404 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 C5orf51A6NDU8 294 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 EPOPA6NHQ4 379 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 ZFP92A6NM28 416 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 G3V3Y1 287 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 RTL8CO15255 209 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 CFLARO15519 480 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 RANBP6O60518 1105 aaKnown RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 KRT6AP02538 564 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 KRT6BP04259 564 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 SERPINF2P08697 491 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 XCR1P46094 333 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 KRT6CP48668 564 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 P2RY4P51582 365 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 HAND2P61296 217 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 CD226Q15762 336 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 SHROOM1Q2M3G4 852 aaPredicted RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 AARDQ4LEZ3 155 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms