RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 OR4D11Q8NGI4 311 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 GTPBP3Q969Y2 492 aaKnown RBP19.45■□□□□ 0.7
USP39-203ENST00000409470 NODALQ96S42 347 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 BTBD2Q9BX70 525 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 NMNAT1Q9HAN9 279 aaPredicted RBP19.45■□□□□ 0.7
USP39-203ENST00000409470 WNT16Q9UBV4 365 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 ASNA1O43681 348 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 HTR1AP08908 422 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 DEFB110Q30KQ9 67 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 GPR107Q5VW38 600 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 KLHL35Q6PF15 583 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 FAM111BQ6SJ93 734 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 CCDC71Q8IV32 467 aaPredicted RBP19.44■□□□□ 0.7
USP39-203ENST00000409470 ALDH16A1Q8IZ83 802 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 ARL14Q8N4G2 192 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 ISOC1Q96CN7 298 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 NELL2Q99435 816 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 PSD2Q9BQI7 771 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 IL21RQ9HBE5 538 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 FAM60AQ9NP50 221 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 PRDM9Q9NQV7 894 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 PAK1IP1Q9NWT1 392 aaPredicted RBP19.44■□□□□ 0.7
USP39-203ENST00000409470 COLQQ9Y215 455 aaPredicted RBP19.44■□□□□ 0.7
USP39-203ENST00000409470 SLC9A8Q9Y2E8 581 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 PCDHGA6Q9Y5G7 932 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 A0A1W2PPC1 479 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 E9PQ18 207 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 M0R3H8 397 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 STK25O00506 426 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 NME6O75414 186 aaPredicted RBP19.44■□□□□ 0.7
USP39-203ENST00000409470 H1F0P07305 194 aaKnown RBP19.44■□□□□ 0.7
USP39-203ENST00000409470 CPMP14384 443 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 PPM1FP49593 454 aaPredicted RBP19.44■□□□□ 0.7
USP39-203ENST00000409470 CXCR4P61073 352 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 ID2Q02363 134 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 XAF1Q6GPH4 301 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 USP53Q70EK8 1073 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 C16orf62Q7Z3J2 963 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 IQCHQ86VS3 1027 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 LACC1Q8IV20 430 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 AVL9Q8NBF6 648 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 OR5T3Q8NGG3 340 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 ADAMTS15Q8TE58 950 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 UBE2FQ969M7 185 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 GIMAP5Q96F15 307 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 MS4A4EQ96PG1 132 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 WFDC6Q9BQY6 131 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 PCED1AQ9H1Q7 454 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 CDC14AQ9UNH5 594 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 CLCA2Q9UQC9 943 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 LIPT1Q9Y234 373 aa19.44■□□□□ 0.7
USP39-203ENST00000409470 TRBV4-1A0A0J9YWV2 114 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 ARRDC5A6NEK1 342 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 GALR3O60755 368 aaPredicted RBP19.43■□□□□ 0.7
USP39-203ENST00000409470 PORP16435 677 aaPredicted RBP19.43■□□□□ 0.7
USP39-203ENST00000409470 CBLP22681 906 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 PCSK6P29122 969 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 GGT2P36268 569 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 MAN2A2P49641 1150 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 SHC2P98077 582 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.43■□□□□ 0.7
USP39-203ENST00000409470 PRAMEF8Q5VWM4 474 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 PRAMEF7Q5VXH5 474 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 WDR53Q7Z5U6 358 aaPredicted RBP19.43■□□□□ 0.7
USP39-203ENST00000409470 GJD3Q8N144 294 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 C19orf47Q8N9M1 422 aaKnown RBP19.43■□□□□ 0.7
USP39-203ENST00000409470 CALML5Q9NZT1 146 aa19.43■□□□□ 0.7
USP39-203ENST00000409470 HCRTR1O43613 425 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 PCDHGA12O60330 932 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 FAM20BO75063 409 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 SEMA7AO75326 666 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 TRMUO75648 421 aaKnown RBP19.42■□□□□ 0.7
USP39-203ENST00000409470 GASTP01350 101 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 PROX2Q3B8N5 592 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 DCST1Q5T197 706 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 LAIR1Q6GTX8 287 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 COMTD1Q86VU5 262 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 ENTHD1Q8IYW4 607 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 OR13F1Q8NGS4 319 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 FAM81AQ8TBF8 368 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 ZFAND2BQ8WV99 257 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 HSPA12BQ96MM6 686 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 SLC38A3Q99624 504 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 QRSL1Q9H0R6 528 aaKnown RBP19.42■□□□□ 0.7
USP39-203ENST00000409470 LIN28AQ9H9Z2 209 aaKnown RBP19.42■□□□□ 0.7
USP39-203ENST00000409470 GIN1Q9NXP7 522 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 ENOPH1Q9UHY7 261 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 SLC9B1P1A6NJY1 282 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 DUXAA6NLW8 204 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 ZNF701M0R085 212 aaPredicted RBP19.42■□□□□ 0.7
USP39-203ENST00000409470 LDB3O75112 727 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 FASLGP48023 281 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 SMIM11AP58511 58 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 HPCAP84074 193 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 SMN1Q16637 294 aaKnown RBP19.42■□□□□ 0.7
USP39-203ENST00000409470 MFSD12Q6NUT3 480 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 TRNT1Q96Q11 434 aaKnown RBP19.42■□□□□ 0.7
USP39-203ENST00000409470 PINK1Q9BXM7 581 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 NTMQ9P121 344 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms