RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 ACER3Q9NUN7 267 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 GTF2A1LQ9UNN4 478 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 EXO1Q9UQ84 846 aaKnown RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 WBP11Q9Y2W2 641 aaKnown RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 YARS2Q9Y2Z4 477 aaKnown RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 RIF1Q5UIP0 2472 aaKnown RBP12.66□□□□□ -0.38
COL6A2-204ENST00000409416 IGLV3-16A0A075B6K0 115 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 CCRL2O00421 344 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 RNASET2O00584 256 aaKnown RBP12.66□□□□□ -0.38
COL6A2-204ENST00000409416 SLCO2B1O94956 709 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 SEMG1P04279 462 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 RB1P06400 928 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PRPH2P23942 346 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 NOS3P29474 1203 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 MAN2A2P49641 1150 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ZNF181Q2M3W8 571 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
COL6A2-204ENST00000409416 BCL7AQ4VC05 210 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PARM1Q6UWI2 310 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ZNF730Q6ZMV8 503 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 GDPD3Q7L5L3 318 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 GPR151Q8TDV0 419 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 SLC35G5Q96KT7 338 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 C6orf106Q9H6K1 298 aaPredicted RBP12.66□□□□□ -0.38
COL6A2-204ENST00000409416 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PLPP1O14494 284 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 AP3D1O14617 1153 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 TMPRSS11DO60235 418 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PSIP1O75475 530 aaKnown RBP12.66□□□□□ -0.38
COL6A2-204ENST00000409416 NTSP30990 170 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 GJA4P35212 333 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 MC3RP41968 323 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ODF4Q2M2E3 257 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 MTFR2Q6P444 385 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 CADM2Q8N3J6 435 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 OR9A2Q8NGT5 310 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 SLC30A2Q9BRI3 323 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 COMMD3Q9UBI1 195 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 GULP1Q9UBP9 304 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 SATB2Q9UPW6 733 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PSMD9O00233 223 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 IDH3BO43837 385 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ASGR2P07307 311 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 FURINP09958 794 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ERVK-21P61565 698 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 OR2G6Q5TZ20 316 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 FRMPD2BQ6IN97 320 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PNCKQ6P2M8 343 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 FAM131AQ6UXB0 335 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 HERVK_113Q902F9 699 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 IL21RQ9HBE5 538 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 PHPT1Q9NRX4 125 aaPredicted RBP12.66□□□□□ -0.38
COL6A2-204ENST00000409416 ENPP4Q9Y6X5 453 aa12.66□□□□□ -0.38
COL6A2-204ENST00000409416 HEATR5BQ9P2D3 2071 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 GPR37L1O60883 481 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 GPX5O75715 221 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 ADRA2AP08913 450 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 KELP23276 732 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SLC9A3P48764 834 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 CCR8P51685 355 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 XKP51811 444 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 RGS8P57771 180 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 HEPACAMQ14CZ8 416 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 CST6Q15828 149 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 TIMM50Q3ZCQ8 353 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 LILRA6Q6PI73 481 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 USP30Q70CQ3 517 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 NRARPQ7Z6K4 114 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 ZNF689Q96CS4 500 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 TMED9Q9BVK6 235 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 BHLHE41Q9C0J9 482 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 TP63Q9H3D4 680 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SLAMF7Q9NQ25 335 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 UGDHO60701 494 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SDC3O75056 442 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 TSC22D2O75157 780 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 CDRT1O95170 752 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 APODP05090 189 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 TSPAN19P0C672 248 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 HOXB2P14652 356 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 ACVR2AP27037 513 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 CASP3P42574 277 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 GSTM5P46439 218 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 PRLHRP49683 370 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 ZNF77Q15935 545 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 MPEG1Q2M385 716 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 GXYLT1Q4G148 440 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms