RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 NIPBLQ6KC79 2804 aaeCLIP7.07□□□□□ -1.28
LSM5-202ENST00000409292 CTAGE15A4D2H0 777 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 RTCAO00442 366 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 TMCC2O75069 709 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 GUCY1B2O75343 617 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 TRIM3O75382 744 aaPredicted RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 CBR3O75828 277 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 RCBTB2O95199 551 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 CRHP06850 196 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 SLC35E2BP0CK96 405 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 SLC35E2P0CK97 266 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 NR2F6P10588 404 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 CPN1P15169 458 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 STMN1P16949 149 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 NAGAP17050 411 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 PTX3P26022 381 aaPredicted RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 PIK3R1P27986 724 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 DEKP35659 375 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 KRT20P35900 424 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ELK3P41970 407 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 KCNJ5P48544 419 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 EEFSECP57772 596 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 TAS2R39P59534 338 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 IGLV3-21P80748 117 aaPredicted RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 FRG1Q14331 258 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 EBPQ15125 230 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 ACKR1Q16570 336 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 WIPI1Q5MNZ9 446 aaPredicted RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 DEPDC1Q5TB30 811 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 TIGD3Q6B0B8 471 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 SLC30A6Q6NXT4 461 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ANGPTL8Q6UXH0 198 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 CXXC5Q7LFL8 322 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 CTAGE6Q86UF2 777 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ZC3HC1Q86WB0 502 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 GRAMD2AQ8IUY3 354 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ZCCHC7Q8N3Z6 543 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 STAG3L4Q8TBR4 150 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 SPPL2AQ8TCT8 520 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ZNF473Q8WTR7 871 aaKnown RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 WDYHV1Q96HA8 205 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 TMEM41AQ96HV5 264 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 GNRHR2Q96P88 292 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 FAM111AQ96PZ2 611 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 MED18Q9BUE0 208 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 UGT2B28Q9BY64 529 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 AICDAQ9GZX7 198 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 RHOJQ9H4E5 214 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 UBTD1Q9HAC8 227 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 GALNT8Q9NY28 637 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 KLRF1Q9NZS2 232 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 OPTCQ9UBM4 332 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 FETUBQ9UGM5 382 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ZNF490Q9ULM2 529 aaPredicted RBP7.07□□□□□ -1.28
LSM5-202ENST00000409292 SLC6A5Q9Y345 797 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 CSPG4Q6UVK1 2322 aa7.07□□□□□ -1.28
LSM5-202ENST00000409292 ARID1AO14497 2285 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 NINQ8N4C6 2090 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 GOLGA6L10A6NI86 522 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 SAP18O00422 153 aaKnown RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 ZNF354AO60765 605 aaPredicted RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 SH3BGRLO75368 114 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 SMNDC1O75940 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
LSM5-202ENST00000409292 LRATO95237 230 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 ALDOAP04075 364 aaKnown RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 TP53P04637 393 aaPredicted RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 RHOXF2BP0C7M4 288 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 CCDC166P0CW27 439 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 NT5EP21589 574 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 ARL1P40616 181 aaPredicted RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 PIK3CBP42338 1070 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 CASP3P42574 277 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 CASP2P42575 452 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 WNT3P56703 355 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 SLC37A1P57057 533 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 FBXW4P57775 412 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 SRYQ05066 204 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 SNTA1Q13424 505 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 EIPR1Q53HC9 387 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 OR52E8Q6IFG1 317 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 ZNF793Q6ZN11 406 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 RAPH1Q70E73 1250 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 NUP54Q7Z3B4 507 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 TBC1D1Q86TI0 1168 aaPredicted RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 YRDCQ86U90 279 aaKnown RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 IFNEQ86WN2 208 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 NUDT13Q86X67 352 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 LAS2Q8IYD9 372 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 AGGF1Q8N302 714 aaeCLIP7.06□□□□□ -1.28
LSM5-202ENST00000409292 GBP7Q8N8V2 638 aaPredicted RBP7.06□□□□□ -1.28
LSM5-202ENST00000409292 C17orf47Q8NEP4 570 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 OR7G3Q8NG95 312 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 OR7G1Q8NGA0 311 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 ACTRT1Q8TDG2 376 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 TMEM171Q8WVE6 324 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 EXT2Q93063 718 aa7.06□□□□□ -1.28
LSM5-202ENST00000409292 INTS12Q96CB8 462 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms