RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 NUDT1P36639 197 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 LIM2P55344 173 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 PRR5P85299 388 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 NPRL3Q12980 569 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CDK5R2Q13319 367 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZC3H12BQ5HYM0 836 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF691Q5VV52 312 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 Q6ZPB1 254 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ABHD13Q7L211 337 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 WDR53Q7Z5U6 358 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 GPR141Q7Z602 305 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RBM45Q8IUH3 476 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 TAGAPQ8N103 731 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 LGI4Q8N135 537 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 GPR32P1Q8NGA4 272 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 OR10G2Q8NGC3 310 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 OR4K14Q8NGD5 310 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 OR9Q2Q8NGE9 314 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 OR5T3Q8NGG3 340 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 PHF10Q8WUB8 498 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 HDAC2Q92769 488 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 UBE2FQ969M7 185 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ITPKCQ96DU7 683 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ELP4Q96EB1 424 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 SMIM10Q96HG1 83 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF681Q96N22 645 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 SERINC2Q96SA4 455 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CDX2Q99626 313 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 PIP5K1AQ99755 562 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CENPOQ9BU64 300 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RSPO3Q9BXY4 272 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ROGDIQ9GZN7 287 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CCDC90BQ9GZT6 254 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 SRA1Q9HD15 236 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 FAM60AQ9NP50 221 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RASSF1Q9NS23 344 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 THSD1Q9NS62 852 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ACER3Q9NUN7 267 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RLIMQ9NVW2 624 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZSCAN32Q9NX65 697 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 KCMF1Q9P0J7 381 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 PHF11Q9UIL8 331 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 DAPP1Q9UN19 280 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CLCA2Q9UQC9 943 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 KCNE3Q9Y6H6 103 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CEPT1Q9Y6K0 416 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CCDC88CQ9P219 2028 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 FAM221BA6H8Z2 402 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 TRIM64A6NGJ6 449 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ADARB2-AS1A8MUL3 147 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 TLR4O00206 839 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZSCAN9O15535 394 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 DPM1O60762 260 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 SDC3O75056 442 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 LDB3O75112 727 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RECKO95980 971 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CSF2P04141 144 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CTSBP07858 339 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ITGAMP11215 1152 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 FOSL2P15408 326 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RHCEP18577 417 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF10P21506 573 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CRHBPP24387 322 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 FMO3P31513 532 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 XCR1P46094 333 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 KCNJ5P48544 419 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 KHKP50053 298 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CRISP3P54108 245 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RPP38P78345 283 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 TNFRSF17Q02223 184 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 PMS2P3Q13401 168 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ELOCQ15369 112 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 MICAQ29983 383 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 FGD3Q5JSP0 725 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RBM48Q5RL73 367 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 LAIR2Q6ISS4 152 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 FAHD1Q6P587 224 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 TMEM64Q6YI46 380 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 DEF8Q6ZN54 512 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 KRT73Q86Y46 540 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CLVS1Q8IUQ0 354 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ARL14Q8N4G2 192 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF655Q8N720 491 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 CSNK1A1LQ8N752 337 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 SETD9Q8NE22 299 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 OR56A1Q8NGH5 318 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 KLHL6Q8WZ60 621 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 GTPBP3Q969Y2 492 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 SHDQ96IW2 340 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 C10orf90Q96M02 699 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 HSPA12BQ96MM6 686 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 NIPSNAP1Q9BPW8 284 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 WFDC6Q9BQY6 131 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 NPLQ9BXD5 320 aaPredicted RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 RBM38Q9H0Z9 239 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 PAPOLBQ9NRJ5 636 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 GPR27Q9NS67 375 aa3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 DDX18Q9NVP1 670 aaKnown RBP3.74□□□□□ -1.81
LRRTM4-201ENST00000409088 NAALAD2Q9Y3Q0 740 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms