RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 NRBF2Q96F24 287 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 NAF1Q96HR8 494 aaKnown RBP9.19□□□□□ -0.94
POLR1A-202ENST00000409024 MS4A4EQ96PG1 132 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 ZNF347Q96SE7 839 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 CSF3RQ99062 836 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 SEPHS2Q99611 448 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 TACO1Q9BSH4 297 aaKnown RBP9.19□□□□□ -0.94
POLR1A-202ENST00000409024 NDC1Q9BTX1 674 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 EVA1AQ9H8M9 152 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 DDX18Q9NVP1 670 aaKnown RBP9.19□□□□□ -0.94
POLR1A-202ENST00000409024 IRAK4Q9NWZ3 460 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 ACSL6Q9UKU0 697 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 RAB26Q9ULW5 256 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 PADI2Q9Y2J8 665 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 LRCH1Q9Y2L9 728 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
POLR1A-202ENST00000409024 TMEM150CB9EJG8 249 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 M0QX08 132 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 UPK1AO00322 258 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 HMGN4O00479 90 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 NTN3O00634 580 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 FGF17O60258 216 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 B4GALT2O60909 372 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 COQ9O75208 318 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 PRKRAO75569 313 aaKnown RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 PGM3O95394 542 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ONECUT2O95948 504 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CST1P01037 141 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 HMGN2P05204 90 aaKnown RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 RPLP0P05388 317 aaKnown RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 FABP3P05413 133 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CYC1P08574 325 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 NUDT7P0C024 238 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 C8orf89P0DMQ9 161 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ZNF26P17031 533 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CKMT2P17540 419 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CSRP1P21291 193 aaKnown RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ACP1P24666 158 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 MAN2A2P49641 1150 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ARHGDIAP52565 204 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CCL7P80098 99 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ACACAQ13085 2346 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 DSG2Q14126 1118 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 PRICKLE4Q2TBC4 344 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 LRRC23Q53EV4 343 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 IFI44LQ53G44 452 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CYBRD1Q53TN4 286 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 EXOSC6Q5RKV6 272 aaKnown RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 FREM2Q5SZK8 3169 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 FHL5Q5TD97 284 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 C19orf48Q6RUI8 117 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ENPP6Q6UWR7 440 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 TMEM107Q6UX40 140 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 PRSS41Q7RTY9 318 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 AMIGO2Q86SJ2 522 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 HIPK1Q86Z02 1210 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ZDHHC21Q8IVQ6 265 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CLEC4FQ8N1N0 589 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 CDRT4Q8N9R6 151 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 OR9A2Q8NGT5 310 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 IFI44Q8TCB0 444 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 SLC38A5Q8WUX1 472 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 HOXB13Q92826 284 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 SDCCAG3Q96C92 435 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 MMABQ96EY8 250 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ZNF597Q96LX8 424 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 RDH12Q96NR8 316 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 TRNT1Q96Q11 434 aaKnown RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 STACQ99469 402 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 NUDT22Q9BRQ3 303 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 SPRTNQ9H040 489 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 OR51I1Q9H343 314 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 TRIM45Q9H8W5 580 aaPredicted RBP9.18□□□□□ -0.94
POLR1A-202ENST00000409024 POLE3Q9NRF9 147 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 PRTFDC1Q9NRG1 225 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 THSD1Q9NS62 852 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 FGF21Q9NSA1 209 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 STARD5Q9NSY2 213 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 KLHL3Q9UH77 587 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 LAMA5O15230 3695 aa9.18□□□□□ -0.94
POLR1A-202ENST00000409024 ADAMTS20P59510 1910 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 IGHV5-10-1A0A0J9YXX1 117 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 A0A1B0GX78 115 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 A0A1W2PQM1 296 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 ZNF860A6NHJ4 632 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 PATE3B3GLJ2 98 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 TMX2-CTNND1H3BSU7 103 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 GNGT2O14610 69 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 DENRO43583 198 aaKnown RBP9.17□□□□□ -0.94
POLR1A-202ENST00000409024 GCM2O75603 506 aaPredicted RBP9.17□□□□□ -0.94
POLR1A-202ENST00000409024 RASAL1O95294 804 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 LDOC1O95751 146 aaPredicted RBP9.17□□□□□ -0.94
POLR1A-202ENST00000409024 ZNF682O95780 498 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 HPRP00739 348 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 NR2F1P10589 423 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 UQCRBP14927 111 aa9.17□□□□□ -0.94
POLR1A-202ENST00000409024 FOLR1P15328 257 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms