RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ARRDC5A6NEK1 342 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 PORP16435 677 aaPredicted RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 MAN2A2P49641 1150 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 SMIM11AP58511 58 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 PIGFQ07326 219 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 FGD3Q5JSP0 725 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 TCTN3Q6NUS6 607 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 RBM45Q8IUH3 476 aaKnown RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 SIX5Q8N196 739 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 ARL14Q8N4G2 192 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 OR7G2Q8NG99 324 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 STARD5Q9NSY2 213 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 TMEM74BQ9NUR3 256 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 NTMQ9P121 344 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 SLC9A8Q9Y2E8 581 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 PCDHGA6Q9Y5G7 932 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 ZNF701M0R085 212 aaPredicted RBP23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 H1F0P07305 194 aaKnown RBP23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 HTR1AP08908 422 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 CPMP14384 443 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 FUT4P22083 530 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 CBLP22681 906 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 GGT2P36268 569 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 C16orf62Q7Z3J2 963 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 AQP11Q8NBQ7 271 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 OR4D11Q8NGI4 311 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 ADAMTS15Q8TE58 950 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 ZFAND2BQ8WV99 257 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 GTPBP3Q969Y2 492 aaKnown RBP23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 ISOC1Q96CN7 298 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 GIMAP5Q96F15 307 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 CCDC90BQ9GZT6 254 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 RASSF1Q9NS23 344 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 ENOPH1Q9UHY7 261 aa23.16■■□□□ 1.3
DNMT3A-206ENST00000406659 GALR3O60755 368 aaPredicted RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 COL9A2Q14055 689 aaPredicted RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 GPR107Q5VW38 600 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 XAF1Q6GPH4 301 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 LACC1Q8IV20 430 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 CCDC71Q8IV32 467 aaPredicted RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 C19orf47Q8N9M1 422 aaKnown RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 CNDP2Q96KP4 475 aaKnown RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 MS4A4EQ96PG1 132 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 TRNT1Q96Q11 434 aaKnown RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 IL21RQ9HBE5 538 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 FAM60AQ9NP50 221 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 PAK1IP1Q9NWT1 392 aaPredicted RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 GIN1Q9NXP7 522 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 PTGFRNQ9P2B2 879 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 COLQQ9Y215 455 aaPredicted RBP23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 NINQ8N4C6 2090 aa23.15■■□□□ 1.3
DNMT3A-206ENST00000406659 TRBV4-1A0A0J9YWV2 114 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 DUXAA6NLW8 204 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 STK25O00506 426 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 FAM20BO75063 409 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 TRMUO75648 421 aaKnown RBP23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 POU2F1P14859 743 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 ID2Q02363 134 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 PROX2Q3B8N5 592 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 DCST1Q5T197 706 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 Q6ZPB1 254 aaPredicted RBP23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 SPEM1Q8N4L4 309 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 UBE2FQ969M7 185 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 DHRS1Q96LJ7 313 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 PINK1Q9BXM7 581 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 SLC24A3Q9HC58 644 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 CDC14AQ9UNH5 594 aa23.14■■□□□ 1.3
DNMT3A-206ENST00000406659 GON4LQ3T8J9 2241 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 M0R3H8 397 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 LGI1O95970 557 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 GASTP01350 101 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 FASLGP48023 281 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 GSSP48637 474 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 TUBA3CQ13748 450 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 DEFB110Q30KQ9 67 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 MFSD12Q6NUT3 480 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 FAM111BQ6SJ93 734 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 HMGN2P46Q86SG4 172 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 ERI1Q8IV48 349 aaKnown RBP23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 MCATQ8IVS2 390 aaKnown RBP23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 ENTHD1Q8IYW4 607 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 CA13Q8N1Q1 262 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 OR5T3Q8NGG3 340 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 OR13F1Q8NGS4 319 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 ZNF420Q8TAQ5 688 aaPredicted RBP23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC35A4Q96G79 324 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 WFDC6Q9BQY6 131 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 UCK1Q9HA47 277 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 CLCA2Q9UQC9 943 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 RNF6Q9Y252 685 aa23.14■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC9B1P1A6NJY1 282 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 CASC3O15234 703 aaKnown RBP23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 OXSR1O95747 527 aaPredicted RBP23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 AGR2O95994 175 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 ALPPP05187 535 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 PROS1P07225 676 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 DCKP27707 260 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 SHC2P98077 582 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms