RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 PTPRFP10586 1907 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 HHLA1C9JL84 531 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 M0R3H8 397 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 RNASET2O00584 256 aaKnown RBP7.03□□□□□ -1.28
HDAC9-202ENST00000405010 SYN3O14994 580 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 INPPL1O15357 1258 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 PRAMEF12O95522 483 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 MRPL3P09001 348 aaKnown RBP7.03□□□□□ -1.28
HDAC9-202ENST00000405010 OR12D1P0DN82 309 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 KCNJ10P78508 379 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 TEKQ02763 1124 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 MBTPS1Q14703 1052 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 ATXN7L3Q14CW9 347 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-202ENST00000405010 SLC5A12Q1EHB4 618 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 TOR1AIP1Q5JTV8 583 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 MANEALQ5VSG8 457 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 C6orf120Q7Z4R8 191 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 MEX3DQ86XN8 651 aaKnown RBP7.03□□□□□ -1.28
HDAC9-202ENST00000405010 ADGRF3Q8IZF5 1079 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 OR7G3Q8NG95 312 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM163Q8TC26 289 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 GIMAP1Q8WWP7 306 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 CIDECQ96AQ7 238 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-202ENST00000405010 SUV39H2Q9H5I1 410 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 PRSS21Q9Y6M0 314 aa7.03□□□□□ -1.28
HDAC9-202ENST00000405010 TMEM88BA6NKF7 163 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 GABRPO00591 440 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 GPR37L1O60883 481 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ITGA10O75578 1167 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SNAI1O95863 264 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 LRG1P02750 347 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 RAB3BP20337 219 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 GCGRP47871 477 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 STK19P49842 368 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 NCBP2P52298 156 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 TAS2R43P59537 309 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 MC1RQ01726 317 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 MAP2K5Q13163 448 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ILKQ13418 452 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 GPR176Q14439 515 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SMCO1Q147U7 214 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 PLEKHS1Q5SXH7 462 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 METTL11BQ5VVY1 283 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF551Q7Z340 670 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 OR5J2Q8NH18 312 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 LKAAEAR1Q8TD35 194 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 CXorf40BQ96DE9 158 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 TCEAL4Q96EI5 215 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 IFT46Q9NQC8 304 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 IMP3Q9NV31 184 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 IKZF2Q9UKS7 526 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF780BQ9Y6R6 833 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SMAD9O15198 467 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 OR1F1O43749 312 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF821O75541 412 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SPDEFO95238 335 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 TCRBP04435 133 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 CLDN20P56880 219 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ERVK-25P63136 954 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 CRYZQ08257 329 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 EXOSC2Q13868 293 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 KCNC3Q14003 757 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 CDONQ4KMG0 1287 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 CLVS2Q5SYC1 327 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SLC30A6Q6NXT4 461 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 BRAT1Q6PJG6 821 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 RNF44Q7L0R7 432 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 OAFQ86UD1 273 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 NANOGP1Q8N7R0 232 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SPRYD4Q8WW59 207 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 FCAMRQ8WWV6 532 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 S100A16Q96FQ6 103 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 RAD9AQ99638 391 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 GAL3ST1Q99999 423 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 TMEM43Q9BTV4 400 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 KATNB1Q9BVA0 655 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 KCNK12Q9HB15 430 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SLAMF7Q9NQ25 335 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 NDUFB11Q9NX14 153 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 IL20RAQ9UHF4 553 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 DIMT1Q9UNQ2 313 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 TMEM5Q9Y2B1 443 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SPACA6W5XKT8 324 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 FER1L6Q2WGJ9 1857 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 NRAPQ86VF7 1730 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 A0A0G2JMP0 313 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 A0A0U1RQF3 1178 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 A0A0X1KG70 313 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ANXA2P2A6NMY6 339 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SOCS7O14512 581 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 POP4O95707 220 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 MT-ND4P03905 459 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ANXA2P07355 339 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 PIPP12273 146 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 PER3P56645 1201 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 ERVFC1P60507 584 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 MAP4K2Q12851 820 aa7.02□□□□□ -1.29
HDAC9-202ENST00000405010 EIF2B5Q13144 721 aaKnown RBP7.02□□□□□ -1.29
HDAC9-202ENST00000405010 SLC14A1Q13336 389 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms