RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 DOHHQ9BU89 302 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 C12orf65Q9H3J6 166 aaKnown RBP12.24□□□□□ -0.45
SDF4-203ENST00000403997 PROK2Q9HC23 129 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 CELSR2Q9HCU4 2923 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 MAT2BQ9NZL9 334 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 HEY2Q9UBP5 337 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 ACAD8Q9UKU7 415 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 CFL2Q9Y281 166 aa12.24□□□□□ -0.45
SDF4-203ENST00000403997 PKDREJQ9NTG1 2253 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 A0A1B0GVC2 190 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 COPEO14579 308 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 BCKDKO14874 412 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 SUSD5O60279 629 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 CDH16O75309 829 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 RFPL3SP0C7P2 107 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 PRF1P14222 555 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 PCSK2P16519 638 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 GPX3P22352 226 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 TMED10P49755 219 aaKnown RBP12.23□□□□□ -0.45
SDF4-203ENST00000403997 FOXA1P55317 472 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 DNAJB13P59910 316 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 NAA20P61599 178 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 RPP38P78345 283 aaKnown RBP12.23□□□□□ -0.45
SDF4-203ENST00000403997 DUSP2Q05923 314 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 PMPCAQ10713 525 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 HEPACAMQ14CZ8 416 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 RPS6KA2Q15349 733 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 LTB4RQ15722 352 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 NNATQ16517 81 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 IMPG1Q17R60 797 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 TRMT12Q53H54 448 aaKnown RBP12.23□□□□□ -0.45
SDF4-203ENST00000403997 EMC4Q5J8M3 183 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 TBCELQ5QJ74 424 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 TMEM198Q66K66 360 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 ZNF585AQ6P3V2 769 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 MCEMP1Q8IX19 187 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 CCDC116Q8IYX3 515 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 MARVELD2Q8N4S9 558 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 C17orf47Q8NEP4 570 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 OR52R1Q8NGF1 315 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 RDH11Q8TC12 318 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 SPPL2AQ8TCT8 520 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 C16orf78Q8WTQ4 265 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 RND1Q92730 232 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 EXOSC8Q96B26 276 aaKnown RBP12.23□□□□□ -0.45
SDF4-203ENST00000403997 ZNF681Q96N22 645 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 EBPLQ9BY08 206 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 SHCBP1LQ9BZQ2 653 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 NXF5Q9H1B4 397 aaKnown RBP12.23□□□□□ -0.45
SDF4-203ENST00000403997 PNPLA3Q9NST1 481 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 TNFRSF10DQ9UBN6 386 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 ZNF639Q9UID6 485 aa12.23□□□□□ -0.45
SDF4-203ENST00000403997 SERTM1A2A2V5 107 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ANKRD33BA6NCL7 494 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 H3BQF6 201 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 AQP7O14520 342 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 HCN1O60741 890 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 SNX4O95219 450 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 CBX7O95931 251 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ANXA4P09525 319 aaPredicted RBP12.22□□□□□ -0.45
SDF4-203ENST00000403997 ACVR2AP27037 513 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ABCD3P28288 659 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 TIA1P31483 386 aaKnown RBP eCLIP12.22□□□□□ -0.455e-7■■□□□ 14
SDF4-203ENST00000403997 WLSQ5T9L3 541 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 BICRALQ6AI39 1079 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 FRMD7Q6ZUT3 714 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 SRRM1Q8IYB3 904 aaKnown RBP12.22□□□□□ -0.45
SDF4-203ENST00000403997 SAMD14Q8IZD0 417 aaPredicted RBP12.22□□□□□ -0.45
SDF4-203ENST00000403997 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 RPRMLQ8N4K4 120 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 SIMC1Q8NDZ2 872 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 OR2W6PQ8NHA6 318 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 SARAFQ96BY9 339 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 CTHRC1Q96CG8 243 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 LCORQ96JN0 433 aaPredicted RBP12.22□□□□□ -0.45
SDF4-203ENST00000403997 ZNF597Q96LX8 424 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ITPAQ9BY32 194 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ZNF703Q9H7S9 590 aaPredicted RBP12.22□□□□□ -0.45
SDF4-203ENST00000403997 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 SLC35C2Q9NQQ7 365 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 GIMAP4Q9NUV9 329 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 OXSMQ9NWU1 459 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ALKBH4Q9NXW9 302 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 B4GALT7Q9UBV7 327 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 PRODH2Q9UF12 536 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 DTX4Q9Y2E6 619 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 PLLPQ9Y342 182 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 ITPR2Q14571 2701 aa12.22□□□□□ -0.45
SDF4-203ENST00000403997 CACNA1CQ13936 2221 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 FIGNL2A6NMB9 653 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 C19orf84I3L1E1 186 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 TRIM3O75382 744 aaPredicted RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 TRAPPC6AO75865 159 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 BCAS2O75934 225 aaPredicted RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 ABCB1P08183 1280 aaPredicted RBP12.21□□□□□ -0.45
SDF4-203ENST00000403997 GDF1P27539 372 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 SOX18P35713 384 aa12.21□□□□□ -0.45
SDF4-203ENST00000403997 CASP3P42574 277 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms