RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 JAZF1Q86VZ6 243 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 NEIL3Q8TAT5 605 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 WDR20Q8TBZ3 569 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 CPNE5Q9HCH3 593 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 PAK6Q9NQU5 681 aaPredicted RBP17.56■□□□□ 0.4
USP48-204ENST00000400301 MARK1Q9P0L2 795 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 N6AMT1Q9Y5N5 214 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 CHURC1-FNTBB4DL54 471 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 CLEC3AO75596 197 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 ZNF3P17036 446 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 TYRP1P17643 537 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 MC3RP41968 323 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 CD83Q01151 205 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 SLC30A6Q6NXT4 461 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 PTOV1Q86YD1 416 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 GALNT12Q8IXK2 581 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 ATP6V1C2Q8NEY4 427 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 MKKSQ9NPJ1 570 aaPredicted RBP17.56■□□□□ 0.4
USP48-204ENST00000400301 CNOT2Q9NZN8 540 aaKnown RBP17.56■□□□□ 0.4
USP48-204ENST00000400301 HCN2Q9UL51 889 aa17.56■□□□□ 0.4
USP48-204ENST00000400301 NDRG4Q9ULP0 352 aaKnown RBP17.56■□□□□ 0.4
USP48-204ENST00000400301 MAP4K2Q12851 820 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 CAMK1Q14012 370 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
USP48-204ENST00000400301 FAM71E1Q6IPT2 247 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 NCCRP1Q6ZVX7 275 aaPredicted RBP17.55■□□□□ 0.4
USP48-204ENST00000400301 NDC1Q9BTX1 674 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 DUSP21Q9H596 190 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 PLPP6Q8IY26 295 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 FBXO15Q8NCQ5 510 aaPredicted RBP17.55■□□□□ 0.4
USP48-204ENST00000400301 OR51A7Q8NH64 312 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 HDHD5Q9BXW7 423 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 EPHX3Q9H6B9 360 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 PCDHGA6Q9Y5G7 932 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 GFRA2O00451 464 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 KHDRBS3O75525 346 aaKnown RBP17.55■□□□□ 0.4
USP48-204ENST00000400301 LIPAP38571 399 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 ZNF385BQ569K4 471 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 RLIMQ9NVW2 624 aa17.55■□□□□ 0.4
USP48-204ENST00000400301 TEX10Q9NXF1 929 aaPredicted RBP17.55■□□□□ 0.4
USP48-204ENST00000400301 ANTXRLA6NF34 631 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 PRDX1Q06830 199 aaKnown RBP17.54■□□□□ 0.4
USP48-204ENST00000400301 PODNL1Q6PEZ8 512 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 CALHM3Q86XJ0 350 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 NRMQ8IXM6 262 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 ITPKCQ96DU7 683 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 MED28Q9H204 178 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 HRASLS2Q9NWW9 162 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 TNS1Q9HBL0 1735 aaKnown RBP17.54■□□□□ 0.4
USP48-204ENST00000400301 GAPDHSO14556 408 aaPredicted RBP17.54■□□□□ 0.4
USP48-204ENST00000400301 P2RY2P41231 377 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 SRCAPQ6ZRS2 3230 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 OR9A2Q8NGT5 310 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 OR5K2Q8NHB8 316 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 ZSWIM3Q96MP5 696 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 WDR92Q96MX6 357 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 RBCK1Q9BYM8 510 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 POLR1DQ9Y2S0 133 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 B4GALT2O60909 372 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 KLF8O95600 359 aaPredicted RBP17.54■□□□□ 0.4
USP48-204ENST00000400301 CA3P07451 260 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 ITFG2Q969R8 447 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 FRMD6Q96NE9 622 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 OR4K3Q96R72 315 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 WACQ9BTA9 647 aa17.54■□□□□ 0.4
USP48-204ENST00000400301 PTTG1O95997 202 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 MRPL3P09001 348 aaKnown RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 RCVRNP35243 200 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 GRK6P43250 576 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 KCNJ10P78508 379 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 HOXC5Q00444 222 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 NANOGNBQ7Z5D8 188 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 OR52E1Q8NGJ3 308 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 FANK1Q8TC84 345 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 TSACCQ96A04 125 aaPredicted RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 COQ8BQ96D53 544 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 GAL3ST4Q96RP7 486 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 TMEM38AQ9H6F2 299 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 TBX21Q9UL17 535 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 OR6C74A6NCV1 312 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 B4DGG1 531 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 CTDSP2O14595 271 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ACSL1P33121 698 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ATP12AP54707 1039 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ZNF91Q05481 1191 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 ZNF77Q15935 545 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 DUSP7Q16829 419 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 BCL7AQ4VC05 210 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 RBM12BQ8IXT5 1001 aaKnown RBP17.53■□□□□ 0.4
USP48-204ENST00000400301 PSD4Q8NDX1 1056 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 SLC38A3Q99624 504 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 MS4A8Q9BY19 250 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 TTTY10Q9BZA0 68 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 PCDH10Q9P2E7 1040 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 WDR37Q9Y2I8 494 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 PCDHGB1Q9Y5G3 927 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 PLD2O14939 933 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 NDUFV2P19404 249 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 GABRA3P34903 492 aa17.53■□□□□ 0.4
USP48-204ENST00000400301 SLC9A3P48764 834 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms