RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PLD4Q96BZ4 506 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 C14orf144Q96I85 54 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 MARK4Q96L34 752 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 TEAD3Q99594 435 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PRRT1Q99946 306 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 CLSTN3Q9BQT9 956 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 SMURF2Q9HAU4 748 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 C11orf16Q9NQ32 467 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 PADI2Q9Y2J8 665 aa6.26□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A0X1KG70 313 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SYT5O00445 386 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CTDSP2O14595 271 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TBX19O60806 448 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SOX30O94993 753 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 C8BP07358 591 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SNRPB2P08579 225 aaKnown RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ATP6V1B2P21281 511 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 UCP1P25874 307 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ELK4P28324 431 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KCNC1P48547 511 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CACNG1Q06432 222 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 AQP6Q13520 282 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GAMTQ14353 236 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SPANXN2Q5MJ10 180 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KCTD9Q7L273 389 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GJD3Q8N144 294 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 LILRA2Q8N149 483 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TOP6BLQ8N6T0 577 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 B3GALNT2Q8NCR0 500 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KCNA7Q96RP8 456 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NAA11Q9BSU3 229 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 DCUN1D5Q9BTE7 237 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SEMA6AQ9H2E6 1030 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NXF3Q9H4D5 531 aaKnown RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 POMKQ9H5K3 350 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ADAM30Q9UKF2 790 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 A0A1W2PPV4 95 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 LINC00862A6NCI5 91 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 KCNU1A8MYU2 1149 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 G3V2T6 193 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PHYHO14832 338 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 RGS5O15539 181 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC28A2O43868 658 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 OR10H3O60404 316 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 DLX3O60479 287 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ERCC1P07992 297 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CNR1P21554 472 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NMBRP28336 390 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GRK5P34947 590 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NAA10P41227 235 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GPR15P49685 360 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GEMP55040 296 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 DNAJB13P59910 316 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 BLOC1S1P78537 153 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 POU4F1Q01851 419 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 HNF4GQ14541 408 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ZBED5Q49AG3 693 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 CARD17Q5XLA6 110 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 LRRN1Q6UXK5 716 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 GK5Q6ZS86 529 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 S100A7AQ86SG5 101 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 VRK2Q86Y07 508 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM210BQ96KR6 192 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PRRC1Q96M27 445 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 P2RY13Q9BPV8 354 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 LRFN3Q9BTN0 628 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PDCD10Q9BUL8 212 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 FSD1LQ9BXM9 530 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 MRPL13Q9BYD1 178 aaKnown RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PCBD2Q9H0N5 130 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SEMA6CQ9H3T2 930 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 LDAHQ9H6V9 325 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 DDIT4Q9NX09 232 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NDRG3Q9UGV2 375 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 RHBDD3Q9Y3P4 386 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SCN1AP35498 2009 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ISPDA4D126 451 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 TCAF2A6NFQ2 919 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 H3BSA7 217 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ACOT8O14734 319 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SEC24AO95486 1093 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC35E2BP0CK96 405 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 F3P13726 295 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF26P17031 533 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NELFEP18615 380 aaKnown RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 OLIG2Q13516 323 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 HSD17B12Q53GQ0 312 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM199XQ6PEV8 388 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 XKRXQ6PP77 449 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 UBE2R2Q712K3 238 aaPredicted RBP6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NRROSQ86YC3 692 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SVOPLQ8N434 492 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 ATPAF2Q8N5M1 289 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 PACRGLQ8N7B6 248 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 NANOGP1Q8N7R0 232 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 OR4A15Q8NGL6 344 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 SMPDL3AQ92484 453 aa6.25□□□□□ -1.41
TM9SF4-202ENST00000398022 C18orf25Q96B23 403 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms