RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MBOAT4Q96T53 435 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 PSME2Q9UL46 239 aa18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 SAMD4AQ9UPU9 718 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-204ENST00000397760 CHST10O43529 356 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ABCB1P08183 1280 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 CCNA2P20248 432 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 TGM1P22735 817 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ELK4P28324 431 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 DCTP40126 519 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 MANFP55145 182 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 PCBP4P57723 403 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 HBA1P69905 142 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 TRA2AQ13595 282 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF829Q3KNS6 432 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 TTLL10Q6ZVT0 673 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 SHISA5Q8N114 240 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 GOT1L1Q8NHS2 421 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 BORCS5Q969J3 196 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF566Q969W8 418 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 MMABQ96EY8 250 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ZBED6CLQ96FA7 236 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 GABARAPL1Q9H0R8 117 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 PALMDQ9NP74 551 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 SLAMF7Q9NQ25 335 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 TBCCD1Q9NVR7 557 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ORC6Q9Y5N6 252 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 CYR61O00622 381 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ITGAMP11215 1152 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 FRKP42685 505 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 RAB38P57729 211 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 SIM1P81133 766 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 SHC2P98077 582 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ZFP36L1Q07352 338 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 NEDD8Q15843 81 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 PRAMEF17Q5VTA0 474 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 XAF1Q6GPH4 301 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 B3GNT8Q7Z7M8 397 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 CHDHQ8NE62 594 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 FBLIM1Q8WUP2 373 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 OR5P2Q8WZ92 322 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 OR6C1Q96RD1 312 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 CDC6Q99741 560 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 NDC1Q9BTX1 674 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 ACSS1Q9NUB1 689 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 TAS2R9Q9NYW1 312 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 HCN3Q9P1Z3 774 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 VPS4AQ9UN37 437 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 HSPE1-MOB4S4R3N1 261 aa18.16■□□□□ 0.5
PDLIM2-204ENST00000397760 COL5A1P20908 1838 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF749O43361 778 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 GDF9O60383 454 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 CCDC159P0C7I6 412 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 ALAS2P22557 587 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 NTSP30990 170 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 TPD52P55327 224 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 ERICH5Q6P6B1 374 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 SHQ1Q6PI26 577 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 METTL27Q8N6F8 245 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 NCLNQ969V3 563 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 CNRIP1Q96F85 164 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 BBS4Q96RK4 519 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 BCL7BQ9BQE9 202 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 AMBRA1Q9C0C7 1298 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 PRDM9Q9NQV7 894 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF282Q9UDV7 671 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 NDOR1Q9UHB4 597 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 ENTPD4Q9Y227 616 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 PCDHGA8Q9Y5G5 932 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 SCN3AQ9NY46 2000 aa18.15■□□□□ 0.5
PDLIM2-204ENST00000397760 EVPLLA8MZ36 301 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 FAM227AF5H4B4 570 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 H0YIG0 161 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 C8orf89P0DMQ9 161 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 CSTF2P33240 577 aaKnown RBP eCLIP18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 POLR2IP36954 125 aaKnown RBP18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 YAP1P46937 504 aaKnown RBP18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 STT3AP46977 705 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 GCGRP47871 477 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 NFATC3Q12968 1075 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 KCNAB2Q13303 367 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 MOGQ16653 247 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF750Q32MQ0 723 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 CCDC157Q569K6 752 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF691Q5VV52 312 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 GTF2IRD2BQ6EKJ0 949 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF551Q7Z340 670 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 GTF2IRD2Q86UP8 949 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 SPARTQ8N0X7 666 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 SETD9Q8NE22 299 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 DCUN1D5Q9BTE7 237 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 GLIPR2Q9H4G4 154 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 SMURF2Q9HAU4 748 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 GIMAP4Q9NUV9 329 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 DHCR7Q9UBM7 475 aaKnown RBP18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 PCDHGB1Q9Y5G3 927 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 MAGED1Q9Y5V3 778 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 ZNF780BQ9Y6R6 833 aa18.14■□□□□ 0.5
PDLIM2-204ENST00000397760 LOC100130705A0A1B0GUX0 176 aa18.14■□□□□ 0.49
PDLIM2-204ENST00000397760 MYO1GB0I1T2 1018 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms