RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 RPL3P39023 403 aaKnown RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 ETV5P41161 510 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 ETV1P50549 477 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 ABI3BPQ7Z7G0 1075 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 ZER1Q7Z7L7 766 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 METTL2AQ96IZ6 378 aaKnown RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 DPH7Q9BTV6 452 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 ZNF717Q9BY31 904 aaPredicted RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 SCO2O43819 266 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 DPM1O60762 260 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 PAK4O96013 591 aaPredicted RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 PRNPP04156 253 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 IFI30P13284 250 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 NDUFAF5Q5TEU4 345 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 RFPL4BQ6ZWI9 263 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 FAM129CQ86XR2 697 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 CXorf40AQ8TE69 158 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 CDCA4Q9BXL8 241 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 SIRT3Q9NTG7 399 aaPredicted RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 KLK4Q9Y5K2 254 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 CPSF4LA6NMK7 179 aaKnown RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 HMGA2P52926 109 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 ZNF79Q15937 498 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 TIMM50Q3ZCQ8 353 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 C9orf64Q5T6V5 341 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 MLIPQ5VWP3 458 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 OR2L2Q8NH16 312 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 OR8D1Q8WZ84 308 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 TMCO6Q96DC7 493 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 PAWRQ96IZ0 340 aaKnown RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 TEFMQ96QE5 360 aaKnown RBP20.62■□□□□ 0.89
NFIX-203ENST00000397661 OR52A5Q9H2C5 316 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 MAU2Q9Y6X3 613 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 A3GALT2U3KPV4 340 aa20.62■□□□□ 0.89
NFIX-203ENST00000397661 TRIOO75962 3097 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 OR6C70A6NIJ9 312 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 CSTF2P33240 577 aaKnown RBP eCLIP20.61■□□□□ 0.89
NFIX-203ENST00000397661 NACC2Q96BF6 587 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 NEURL3Q96EH8 262 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 C12orf66Q96MD2 445 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 LHX9Q9NQ69 397 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 COMMD3Q9UBI1 195 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 PAPLNO95428 1278 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 KELP23276 732 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 TIE1P35590 1138 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 AVPR1BP47901 424 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 SOX9P48436 509 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 SYCE2Q6PIF2 218 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 TMEM107Q6UX40 140 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 NLGN4YQ8NFZ3 816 aaPredicted RBP20.61■□□□□ 0.89
NFIX-203ENST00000397661 OR5P2Q8WZ92 322 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 DIRAS2Q96HU8 199 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 SLC35G5Q96KT7 338 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 GLIPR2Q9H4G4 154 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 PAK6Q9NQU5 681 aaPredicted RBP20.61■□□□□ 0.89
NFIX-203ENST00000397661 CRNNQ9UBG3 495 aaPredicted RBP20.61■□□□□ 0.89
NFIX-203ENST00000397661 SSR3Q9UNL2 185 aa20.61■□□□□ 0.89
NFIX-203ENST00000397661 SMLR1H3BR10 107 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 TSPAN19P0C672 248 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 SDC2P34741 201 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 SAXO2Q658L1 398 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 MRPL43Q8N983 215 aaKnown RBP20.6■□□□□ 0.89
NFIX-203ENST00000397661 UBE2E3Q969T4 207 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 FCRL4Q96PJ5 515 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 ZNF607Q96SK3 696 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 MS4A8Q9BY19 250 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CENPBD1B2RD01 187 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 TMCC2O75069 709 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 NCR1O76036 304 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CISD3P0C7P0 127 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 GPLD1P80108 840 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 ZNF234Q14588 700 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CRTC2Q53ET0 693 aaPredicted RBP20.6■□□□□ 0.89
NFIX-203ENST00000397661 REM2Q8IYK8 340 aaPredicted RBP20.6■□□□□ 0.89
NFIX-203ENST00000397661 V9GYH0 126 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 MEN1O00255 615 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 NDUFS4O43181 175 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 ADAP00813 363 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 SCG5P05408 212 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CRYBB2P43320 205 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 RORCP51449 518 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 C9orf43Q8TAL5 461 aaPredicted RBP20.6■□□□□ 0.89
NFIX-203ENST00000397661 KAT2AQ92830 837 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 ZNF354BQ96LW1 612 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 TBC1D17Q9HA65 648 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CERS4Q9HA82 394 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 DEC1Q9P2X7 70 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CNTRLQ7Z7A1 2325 aa20.6■□□□□ 0.89
NFIX-203ENST00000397661 CCDC182A6NF36 153 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 ERI3O43414 337 aaKnown RBP20.59■□□□□ 0.89
NFIX-203ENST00000397661 PCSK2P16519 638 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 MAT2AP31153 395 aaKnown RBP20.59■□□□□ 0.89
NFIX-203ENST00000397661 HTR2BP41595 481 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 CCR8P51685 355 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 CLDN2P57739 230 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 C18orf63Q68DL7 685 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 DCUN1D3Q8IWE4 304 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 LINC01555Q8NAE3 123 aa20.59■□□□□ 0.89
NFIX-203ENST00000397661 ZBED6CLQ96FA7 236 aaPredicted RBP20.59■□□□□ 0.89
NFIX-203ENST00000397661 C11orf54Q9H0W9 315 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms