RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ADSLP30566 484 aaPredicted RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 CASP3P42574 277 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 TMED10P49755 219 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 RAP1GDS1P52306 607 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 NRG3P56975 720 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 RAB10P61026 200 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 EEF1A1P68104 462 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 DR1Q01658 176 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 TNFRSF17Q02223 184 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 RPS6KA2Q15349 733 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 EEF1A1P5Q5VTE0 462 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 HLA-DQA1Q5Y7H0 255 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 C18orf63Q68DL7 685 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 TIGD3Q6B0B8 471 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 MRM1Q6IN84 353 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 ISCA2Q86U28 154 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SLC35F6Q8N357 371 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 ZNF441Q8N8Z8 693 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 HUS1BQ8NHY5 278 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 LINC01560Q8TB33 94 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SPPL2AQ8TCT8 520 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 PYROXD1Q8WU10 500 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 ABTB1Q969K4 478 aaPredicted RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 ISL2Q96A47 359 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 NTNG2Q96CW9 530 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 WDYHV1Q96HA8 205 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 RILPQ96NA2 401 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 TRIB1Q96RU8 372 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 GPR22Q99680 433 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 CPNE1Q99829 537 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 YIPF4Q9BSR8 244 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SORBS1Q9BX66 1292 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 DDX31Q9H8H2 851 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 CAB39LQ9H9S4 337 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 WDR41Q9HAD4 459 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 CXorf21Q9HAI6 301 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 NMRAL1Q9HBL8 299 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SMYD2Q9NRG4 433 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 BEX4Q9NWD9 120 aaPredicted RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 LYARQ9NX58 379 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 TRMT1Q9NXH9 659 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 OPTCQ9UBM4 332 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 CAMK2AQ9UQM7 478 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 C15orf41Q9Y2V0 281 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 ASB4Q9Y574 426 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 A0A1W2PR48 441 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 WASHC1A8K0Z3 465 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CLCA1A8K7I4 914 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 KDM4EB2RXH2 506 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 H0YIV9 168 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 PLPP1O14494 284 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CASKO14936 926 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 ZSCAN12O43309 604 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 HRGP04196 525 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 FAM58BPP0C7Q3 252 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CPN1P15169 458 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CD53P19397 219 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 SPRP35270 261 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 GCKP35557 465 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 BSGP35613 385 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 MASP1P48740 699 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 HNRNPH2P55795 449 aaKnown RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 WNT3P56703 355 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 FBXW4P57775 412 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 DCAF7P61962 342 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 NKX6-1P78426 367 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 PHEXP78562 749 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 PLAURQ03405 335 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 FUT7Q11130 342 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CUL3Q13618 768 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 RCAN2Q14206 197 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 FASTKD3Q14CZ7 662 aaKnown RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 SETDB1Q15047 1291 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 ZKSCAN8Q15776 578 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 FNDC7Q5VTL7 733 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 LIPJQ5W064 366 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 GRHL2Q6ISB3 625 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 TMEM81Q6P7N7 255 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CYP20A1Q6UW02 462 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CLEC9AQ6UXN8 241 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 TMEM64Q6YI46 380 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 KLHL7Q8IXQ5 586 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 ZBED8Q8IZ13 594 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 C17orf47Q8NEP4 570 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 OR7G1Q8NGA0 311 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 DOK4Q8TEW6 326 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 SMPDL3BQ92485 455 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 TMEM41AQ96HV5 264 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 ZFP3Q96NJ6 502 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 NSUN5Q96P11 429 aaKnown RBP7.99□□□□□ -1.13
CAPN3-208ENST00000397204 RBBP8Q99708 897 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 TM9SF2Q99805 663 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 UGT2B28Q9BY64 529 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 NUDT4Q9NZJ9 180 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 NDRG3Q9UGV2 375 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 SLC6A5Q9Y345 797 aa7.99□□□□□ -1.13
CAPN3-208ENST00000397204 CCDC189A1A4V9 331 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 EFCAB8A8MWE9 144 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 CXorf49A8MYA2 514 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 EEF1E1-BLOC1S5C9J1V9 151 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms