RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ZNF678Q5SXM1 525 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 C2CD4AQ8NCU7 369 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 OR2T33Q8NG76 320 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 KIAA1191Q96A73 305 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 PIP5K1AQ99755 562 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ZNF559Q9BR84 538 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ATF6P18850 670 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 DDCP20711 480 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 MAGEA8P43361 318 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 SLC25A11Q02978 314 aaKnown RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ABHD12BQ7Z5M8 362 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 NSUN5Q96P11 429 aaKnown RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 PEBP4Q96S96 227 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 FAM230AA0A1W2PPH8 454 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ENDOUP21128 410 aaKnown RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 RAB4BP61018 213 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 SIRPAP78324 504 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 SQSTM1Q13501 440 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ENPP6Q6UWR7 440 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 IL20RBQ6UXL0 311 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 OR5AR1Q8NGP9 310 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 RDH12Q96NR8 316 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 AP1S3Q96PC3 154 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ZNF160Q9HCG1 818 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 SIX2Q9NPC8 291 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 DECR2Q9NUI1 292 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 CD8B2A6NJW9 211 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 DFNA5O60443 496 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 CD8BP10966 210 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 GJA5P36382 358 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 SLC6A11P48066 632 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 TPTEP56180 551 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 EIF4HQ15056 248 aaKnown RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 FAM46AQ96IP4 442 aaKnown RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ENKD1Q9H0I2 346 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 A0A0U1RQS6 177 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 PIGRP01833 764 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 AKR1C4P17516 323 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 RNF220Q5VTB9 566 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 PLEKHG7Q6ZR37 379 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 GID4Q8IVV7 300 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 OR51T1Q8NGJ9 327 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 CANT1Q8WVQ1 401 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ZNF649Q9BS31 505 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 TIMMDC1Q9NPL8 285 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 SULT2B1O00204 365 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 FRKP42685 505 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 FNTBP49356 437 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 EIF2B1Q14232 305 aaKnown RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 RABL3Q5HYI8 236 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 MAMDC2Q7Z304 686 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 OR4K13Q8NH42 304 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 ZNF775Q96BV0 537 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 AURKBQ96GD4 344 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-208ENST00000397030 OR14J1Q9UGF5 321 aa16.61■□□□□ 0.25
MCF2L-208ENST00000397030 BCAS2O75934 225 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 HYAL4Q2M3T9 481 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 SHQ1Q6PI26 577 aaKnown RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 WDR53Q7Z5U6 358 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 TEX19Q8NA77 164 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 FGF13Q92913 245 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 C1orf74Q96LT6 269 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 POMPQ9Y244 141 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 PCDHGA10Q9Y5H3 936 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 PPLO60437 1756 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 TIA1P31483 386 aaKnown RBP eCLIP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 NKPD1Q17RQ9 610 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 PSAPL1Q6NUJ1 521 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 ADAMTS18Q8TE60 1221 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 SDSLQ96GA7 329 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 VSX1Q9NZR4 365 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 ABCG2Q9UNQ0 655 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 PPM1BO75688 479 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 HLA-DPB1P04440 258 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 CSNK1EP49674 416 aaKnown RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 ZNF662Q6ZS27 426 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 PPP1R3BQ86XI6 285 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 DPH2Q9BQC3 489 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 KLHL21Q9UJP4 597 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 STK17BO94768 372 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 KDELC1Q6UW63 502 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 ZSWIM9Q86XI8 627 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 C22orf15Q8WYQ4 148 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 SLC2A11Q9BYW1 496 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 ANKMY1Q9P2S6 941 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 A0A087WUU8 490 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 NPIPA5A0A0B4J1W7 369 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 OR6C70A6NIJ9 312 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 NPIPA7E9PJI5 369 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 LDB3O75112 727 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 GNAO1P09471 354 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 NPIPA8P0DM63 369 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 TCN2P20062 427 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 CD97P48960 835 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 HNRNPA0Q13151 305 aaKnown RBP16.6■□□□□ 0.25
MCF2L-208ENST00000397030 KCNJ11Q14654 390 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 CLCA4Q14CN2 919 aa16.6■□□□□ 0.25
MCF2L-208ENST00000397030 PPP1R3AQ16821 1122 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms