RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LIMS2Q7Z4I7 341 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TMED4Q7Z7H5 227 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 SLITRK4Q8IW52 837 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CCDC107Q8WV48 283 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CREB3L1Q96BA8 519 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 KLHL5Q96PQ7 755 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 UTS2RQ9UKP6 389 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 C2orf92A0A1B0GVN3 265 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 C17orf102A2RUQ5 167 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 PRSS47A8MTI9 375 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 FAM220BPB1ANY3 271 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 NDUFS3O75489 264 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 CRYBA1P05813 215 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 CSN2P05814 226 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 MLNP12872 115 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 HOXD8P13378 290 aaPredicted RBP8.02□□□□□ -1.12
NDE1-202ENST00000396355 HPGDP15428 266 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 PTGFRP43088 359 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 CRATP43155 626 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 PSEN2P49810 448 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 DCAF4L1Q3SXM0 396 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 SFRP5Q5T4F7 317 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 FRMPD2BQ6IN97 320 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 NOTUMQ6P988 496 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 QSOX2Q6ZRP7 698 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 GPRIN1Q7Z2K8 1008 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 ABI3BPQ7Z7G0 1075 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 OR2L5Q8NG80 312 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 DNASE1L2Q92874 299 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 SLAMF9Q96A28 289 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 FKBP10Q96AY3 582 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 NPY6RQ99463 290 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 MFFQ9GZY8 342 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 WDR26Q9H7D7 661 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 CTPS2Q9NRF8 586 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 LANCL2Q9NS86 450 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 NDRG3Q9UGV2 375 aa8.02□□□□□ -1.12
NDE1-202ENST00000396355 ZFR2Q9UPR6 939 aaKnown RBP8.02□□□□□ -1.12
NDE1-202ENST00000396355 FNDC1Q4ZHG4 1894 aaPredicted RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 ZCWPW2A0A1B0GU75 182 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 MEIS3P2A8K0S8 358 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 IFNA10P01566 189 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 PMP2P02689 132 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 IFNA4P05014 189 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 LPLP06858 475 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 PEPDP12955 493 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 GJA1P17302 382 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 CELP19835 753 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 CD68P34810 354 aaPredicted RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 PLA2G5P39877 138 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 NPRL3Q12980 569 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 MFSD10Q14728 455 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SPHARQ15513 63 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SLC35F1Q5T1Q4 408 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 GCNT6Q5T4J0 391 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 BLOC1S3Q6QNY0 202 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 GPR155Q7Z3F1 870 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 PDZD3Q86UT5 571 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 LIX1LQ8IVB5 337 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 OR4M1Q8NGD0 313 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 IL20Q9NYY1 176 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 RHCGQ9UBD6 479 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 IL17BQ9UHF5 180 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 KCNIP3Q9Y2W7 256 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SLC6A5Q9Y345 797 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SLC22A23A1A5C7 686 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 CXorf65A6NEN9 183 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 CLDN24A6NM45 220 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 A8MT66 165 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 D6RAR5 112 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 PPP6CO00743 305 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 NIPSNAP2O75323 286 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 CREG1O75629 220 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 MMP2P08253 660 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 CSF3P09919 207 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 PIRTP0C851 137 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 EPHA2P29317 976 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SCNN1AP37088 669 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SRP9P49458 86 aaKnown RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 EEFSECP57772 596 aaKnown RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 ISL1P61371 349 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 UBE2IP63279 158 aaKnown RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 STXBP5Q5T5C0 1151 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SYT6Q5T7P8 510 aaPredicted RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 CLEC20AQ6ZU45 233 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 KIAA0907Q7Z7F0 614 aaPredicted RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 S100A7AQ86SG5 101 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 DPP10Q8N608 796 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 OR52H1Q8NGJ2 320 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 PHOSPHO2Q8TCD6 241 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 NPRL2Q8WTW4 380 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 NUDT8Q8WV74 236 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 MCCC1Q96RQ3 725 aaPredicted RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 HRH4Q9H3N8 390 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 LDAHQ9H6V9 325 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 EIF2B3Q9NR50 452 aaKnown RBP8.02□□□□□ -1.13
NDE1-202ENST00000396355 TAS2R7Q9NYW3 318 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 OSGIN1Q9UJX0 560 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 SLC27A6Q9Y2P4 619 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms