RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RANGRFQ9HD47 186 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 MYNNQ9NPC7 610 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TEX10Q9NXF1 929 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 PTGFRNQ9P2B2 879 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 GNB5O14775 395 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 PTTG1O95997 202 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 LAMP2P13473 410 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 DDCP20711 480 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 GGT2P36268 569 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TGFBR1P36897 503 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 MTAPQ13126 283 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 EFR3AQ14156 821 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 DUSP7Q16829 419 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 DEFB134Q4QY38 66 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 MZT2BQ6NZ67 158 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 FAM122CQ6P4D5 195 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 USP51Q70EK9 711 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 KLHDC8AQ8IYD2 350 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 METTL4Q8N3J2 472 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 OR52L1Q8NGH7 329 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 OR6Q1Q8NGQ2 317 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 RAB7BQ96AH8 199 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TXNDC15Q96J42 360 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 RPS6KB2Q9UBS0 482 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 FAM170BA6NMN3 283 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 NRG2O14511 850 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 ARL4DP49703 201 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 RAB28P51157 221 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 LIPKQ5VXJ0 399 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TANGO2Q6ICL3 276 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 OR4C11Q6IEV9 310 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 CHMP1BQ7LBR1 199 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SLC30A8Q8IWU4 369 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 ENTHD1Q8IYW4 607 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TTLQ8NG68 377 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 FCRL4Q96PJ5 515 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 SLA2Q9H6Q3 261 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 NECTIN3Q9NQS3 549 aa9.99□□□□□ -0.81
CALD1-203ENST00000393118 TMEFF2Q9UIK5 374 aaPredicted RBP9.99□□□□□ -0.81
CALD1-203ENST00000393118 KCNE1BA0A087WTH5 132 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 URADA6NGE7 173 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 DNAJB5O75953 348 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 UBL4AP11441 157 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 POLR2CP19387 275 aaPredicted RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 GP2P55259 537 aaKnown RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 HOXC5Q00444 222 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 DBPQ10586 325 aaPredicted RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 EIF2B5Q13144 721 aaKnown RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 CDK10Q15131 360 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 WSCD2Q2TBF2 565 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 FAM92BQ6ZTR7 304 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 B3GNT7Q8NFL0 401 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 PIGXQ8TBF5 258 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 RIT1Q92963 219 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 DHRS9Q9BPW9 319 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ZNF624Q9P2J8 865 aaPredicted RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 SLC23A2Q9UGH3 650 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 GPR52Q9Y2T5 361 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 LINC01553A4QN01 128 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 WASHC1A8K0Z3 465 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 CLDN2P57739 230 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ILF3Q12906 894 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■■■□ 20.7
CALD1-203ENST00000393118 CAMK1Q14012 370 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 LARS2Q15031 903 aaKnown RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 WASH2PQ6VEQ5 465 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 CALHM3Q86XJ0 350 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 SFTPA1Q8IWL2 248 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 GPR151Q8TDV0 419 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 SLC38A5Q8WUX1 472 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 RELTQ969Z4 430 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 UQCC2Q9BRT2 126 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 TSSK6Q9BXA6 273 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 LGR4Q9BXB1 951 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 QRSL1Q9H0R6 528 aaKnown RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 MMP27Q9H306 513 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 GPN2Q9H9Y4 310 aaPredicted RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 NDOR1Q9UHB4 597 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 MSRAQ9UJ68 235 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 MKLN1Q9UL63 735 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 YY2O15391 372 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 KIAA0513O60268 411 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ZNF806P0C7X5 589 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 MYL9P24844 172 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 CSTF2P33240 577 aaKnown RBP eCLIP9.98□□□□□ -0.819e-7■■■■□ 19.9
CALD1-203ENST00000393118 MRPL19P49406 292 aaKnown RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 WNT3P56703 355 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ZMYND11Q15326 602 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ADPRMQ3LIE5 342 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ITPRIPL2Q3MIP1 535 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ZNF542PQ5EBM4 170 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 LCTLQ6UWM7 567 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 SHFQ7M4L6 423 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 SYNPOQ8N3V7 929 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 RHOXF1Q8NHV9 184 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 C9orf43Q8TAL5 461 aaPredicted RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 TSACCQ96A04 125 aaPredicted RBP9.98□□□□□ -0.81
CALD1-203ENST00000393118 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 RNFT2Q96EX2 444 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 CAMK1GQ96NX5 476 aa9.98□□□□□ -0.81
CALD1-203ENST00000393118 ZDHHC5Q9C0B5 715 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms