RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 PCDH15Q96QU1 1955 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 TMEM131Q92545 1883 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 CCDC88CQ9P219 2028 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 CCDC163A0A0D9SF12 145 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 TLCD2A6NGC4 264 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 ADAMDEC1O15204 470 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 CD247P20963 164 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 AGXTP21549 392 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 EPHA2P29317 976 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 CDH12P55289 794 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 FUT5Q11128 374 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 RAPSNQ13702 412 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 GALNT15Q8N3T1 639 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 ARHGEF39Q8N4T4 335 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 Q8N9G6 341 aaPredicted RBP16.57■□□□□ 0.24
SHTN1-203ENST00000392901 SGCDQ92629 289 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 PROX1Q92786 737 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 GIMAP5Q96F15 307 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 ERVMER34-1Q9H9K5 563 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 PDE7BQ9NP56 450 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 KIF17Q9P2E2 1029 aa16.57■□□□□ 0.24
SHTN1-203ENST00000392901 TP53BP1Q12888 1972 aaPredicted RBP16.56■□□□□ 0.24
SHTN1-203ENST00000392901 BCKDKO14874 412 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 CHST10O43529 356 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 SERPINB7O75635 380 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 IFNW1P05000 195 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 CHRM4P08173 479 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 ITGAMP11215 1152 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 GNSP15586 552 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 ARRB1P49407 418 aaPredicted RBP16.56■□□□□ 0.24
SHTN1-203ENST00000392901 HLCSP50747 726 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 BNC1Q01954 994 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 GANABQ14697 944 aaKnown RBP16.56■□□□□ 0.24
SHTN1-203ENST00000392901 TRMT12Q53H54 448 aaKnown RBP16.56■□□□□ 0.24
SHTN1-203ENST00000392901 C6orf141Q5SZD1 244 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 FAHD1Q6P587 224 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 MIPOL1Q8TD10 442 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 NPLQ9BXD5 320 aaPredicted RBP16.56■□□□□ 0.24
SHTN1-203ENST00000392901 HCN3Q9P1Z3 774 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 PLCL2Q9UPR0 1127 aa16.56■□□□□ 0.24
SHTN1-203ENST00000392901 NUDT21O43809 227 aaKnown RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 JRKO75564 520 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 GPR75O95800 540 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 GIMD1P0DJR0 217 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 CDH2P19022 906 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 NT5EP21589 574 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 CRHBPP24387 322 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 HOXA6P31267 233 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 SEPHS1P49903 392 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 EPHA4P54764 986 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 RAB38P57729 211 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 KCNAB1Q14722 419 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 SHBQ15464 509 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 SNAP47Q5SQN1 464 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 KRT73Q86Y46 540 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 VANGL1Q8TAA9 524 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 ADAMTS15Q8TE58 950 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 TANKQ92844 425 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 ACTRT3Q9BYD9 372 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 PRDM9Q9NQV7 894 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 KRT84Q9NSB2 600 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 RHCGQ9UBD6 479 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 AASSQ9UDR5 926 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 GPC6Q9Y625 555 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 ENPP4Q9Y6X5 453 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 CASC3O15234 703 aaKnown RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 LAMTOR5O43504 91 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 FOXS1O43638 330 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 ZBTB11O95625 1053 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 EEF1B2P24534 225 aaKnown RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 MAGEA8P43361 318 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 XCR1P46094 333 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 GABRA4P48169 554 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 KCNJ5P48544 419 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 MAT1AQ00266 395 aaKnown RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 KCNC4Q03721 635 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 NDUFA9Q16795 377 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 GATAD2AQ86YP4 633 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 LGI4Q8N135 537 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 METTL27Q8N6F8 245 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 SLC16A11Q8NCK7 471 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 SLC9A6Q92581 669 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 NECAB3Q96P71 396 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 QRSL1Q9H0R6 528 aaKnown RBP16.55■□□□□ 0.24
SHTN1-203ENST00000392901 FSCN3Q9NQT6 498 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 CSNK1G3Q9Y6M4 447 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 NINQ8N4C6 2090 aa16.55■□□□□ 0.24
SHTN1-203ENST00000392901 HYKKA2RU49 373 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 DNAJB5O75953 348 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 GLB1P16278 677 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 MAN2A2P49641 1150 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 CSTF1Q05048 431 aaKnown RBP16.54■□□□□ 0.24
SHTN1-203ENST00000392901 PMS2P3Q13401 168 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 GNA13Q14344 377 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 PMS2CLQ68D20 193 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 KCTD8Q6ZWB6 473 aa16.54■□□□□ 0.24
SHTN1-203ENST00000392901 OR2L13Q8N349 312 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms