RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 CLIP4Q8N3C7 705 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 SCAIQ8N9R8 606 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 OR2L3Q8NG85 312 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 OTUB1Q96FW1 271 aaPredicted RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 MACROD1Q9BQ69 325 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 C1QTNF2Q9BXJ5 285 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 POLDIP3Q9BY77 421 aaKnown RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 HHATLQ9HCP6 504 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 MAN2C1Q9NTJ4 1040 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 MOSPD1Q9UJG1 213 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 KLHL20Q9Y2M5 609 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 ATG4BQ9Y4P1 393 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 CKAP5Q14008 2032 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 PGRMC2O15173 223 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 PRICKLE3O43900 615 aaPredicted RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 GPX5O75715 221 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 AIFM1O95831 613 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 ENDOUP21128 410 aaKnown RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 MMP11P24347 488 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 BUD31P41223 144 aaPredicted RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 PCYT1AP49585 367 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 DOC2BQ14184 412 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 ZNF776Q68DI1 518 aaPredicted RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 GDPGP1Q6ZNW5 385 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 OLIG3Q7RTU3 272 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 IQCHQ86VS3 1027 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 ZNF513Q8N8E2 541 aaPredicted RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 SRFBP1Q8NEF9 429 aaKnown RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 CNRIP1Q96F85 164 aaPredicted RBP13.79□□□□□ -0.2
SC5D-202ENST00000392789 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 SLX1AQ9BQ83 275 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 YIPF4Q9BSR8 244 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 SARGQ9BW04 601 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 PINK1Q9BXM7 581 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 NUAK2Q9H093 628 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 ZNF232Q9UNY5 417 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 GPSM3Q9Y4H4 160 aa13.79□□□□□ -0.2
SC5D-202ENST00000392789 DOCK9Q9BZ29 2069 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 PRR23AA6NEV1 266 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 KDM1AO60341 852 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 TPST2O60704 377 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 EPPINO95925 133 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 CKMT1AP12532 417 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 GSTM3P21266 225 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 TSFMP43897 325 aaKnown RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 PRR5P85299 388 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SLC13A2Q13183 592 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SPANXN2Q5MJ10 180 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SLC48A1Q6P1K1 146 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 WDR53Q7Z5U6 358 aaPredicted RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 ZER1Q7Z7L7 766 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 CCDC116Q8IYX3 515 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 FBXL6Q8N531 539 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 FAM26EQ8N5C1 309 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 POC5Q8NA72 575 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 MORN4Q8NDC4 146 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 PROKR2Q8NFJ6 384 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 GIMAP4Q9NUV9 329 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 CRNNQ9UBG3 495 aaPredicted RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 CLEC2DQ9UHP7 191 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 FBXW2Q9UKT8 454 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 A0A075B6Q4 140 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 MYL12BO14950 172 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 PRKYO43930 277 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 PTTG1O95997 202 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 ALPPL2P10696 532 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 CSNK2A2P19784 350 aaPredicted RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 PSMA1P25786 263 aaKnown RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 CMPK1P30085 196 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 PTGER1P34995 402 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SOX3P41225 446 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SEPHS1P49903 392 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 GINS1Q14691 196 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 CCDC92Q53HC0 331 aaPredicted RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 TMEM53Q6P2H8 277 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 TMEM107Q6UX40 140 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 TMEM145Q8NBT3 493 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 GANCQ8TET4 914 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 NR4A3Q92570 626 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
SC5D-202ENST00000392789 EXOSC4Q9NPD3 245 aaKnown RBP13.78□□□□□ -0.2
SC5D-202ENST00000392789 MYO10Q9HD67 2058 aa13.77□□□□□ -0.2
SC5D-202ENST00000392789 ATG2AQ2TAZ0 1938 aa13.77□□□□□ -0.2
SC5D-202ENST00000392789 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
SC5D-202ENST00000392789 A0A1W2PQU0 124 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms