RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SH3GLB1Q9Y371 365 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 A0A0G2JPF8 293 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 DUXAA6NLW8 204 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 HNRNPCL2B2RXH8 293 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 HNRNPCL3B7ZW38 293 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 YKT6O15498 198 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 HS6ST1O60243 411 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PLOD3O60568 738 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 BMP10O95393 424 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 AGR2O95994 175 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 IFNW1P05000 195 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 CHRM4P08173 479 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 HNRNPCL4P0DMR1 293 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PNLIPP16233 465 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 CD1CP29017 333 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 CSF2RBP32927 897 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 MAPK10P53779 464 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 RAD23AP54725 363 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ID2Q02363 134 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 GRM7Q14831 915 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRSS42Q7Z5A4 293 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 GPR32P1Q8NGA4 272 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 SAP25Q8TEE9 199 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PIGKQ92643 395 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PROX1Q92786 737 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF354BQ96LW1 612 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 COL21A1Q96P44 957 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 MBOAT4Q96T53 435 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 BARD1Q99728 777 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 SPATA5L1Q9BVQ7 753 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 AMBRA1Q9C0C7 1298 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 EQTNQ9NQ60 294 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 CALML5Q9NZT1 146 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 PDP1Q9P0J1 537 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 SEC14L3Q9UDX4 400 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 FBXO4Q9UKT5 387 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ORC6Q9Y5N6 252 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 LYVE1Q9Y5Y7 322 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 ENPP4Q9Y6X5 453 aa10.73□□□□□ -0.69
SMARCAL1-203ENST00000392128 LAMA1P25391 3075 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ADAMTS20P59510 1910 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 H3BMH7 237 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLC35E2P0CK97 266 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 RHCEP18577 417 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 HOXD12P35452 270 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 AVPR1BP47901 424 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 COL9A2Q14055 689 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRICKLE4Q2TBC4 344 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 HLA-BQ31612 363 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZIK1Q3SY52 487 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 AMZ1Q400G9 498 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 CYP27C1Q4G0S4 372 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ATAD3BQ5T9A4 648 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 TTC23Q5W5X9 447 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ANKRD34AQ69YU3 496 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 KDM4DQ6B0I6 523 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 HEPHL1Q6MZM0 1159 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF605Q86T29 641 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 KMT5CQ86Y97 462 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF595Q8IYB9 648 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 D2HGDHQ8N465 521 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 Q8N9G6 341 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR4C6Q8NH72 309 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 OTUB1Q96FW1 271 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 TRNT1Q96Q11 434 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 PIP5K1AQ99755 562 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 RSPO3Q9BXY4 272 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 SOX17Q9H6I2 414 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 IRAK4Q9NWZ3 460 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 GIN1Q9NXP7 522 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 MRPS33Q9Y291 106 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 KCNE3Q9Y6H6 103 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 SPTBP11277 2137 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 DSPPQ9NZW4 1301 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 DPPA5A6NC42 116 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 H0YIG0 161 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 TNFRSF11BO00300 401 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 H6PDO95479 791 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 MSL3P1P0C860 447 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 SMIM18P0DKX4 95 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 MYF5P13349 255 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 NT5EP21589 574 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 IGFBP5P24593 272 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 DAPP51397 102 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 MGAT2Q10469 447 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAM214AQ32MH5 1076 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 GPAT3Q53EU6 434 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 TRMT12Q53H54 448 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 EXOSC6Q5RKV6 272 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 AP1ARQ63HQ0 302 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAHD1Q6P587 224 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 CYP4Z1Q86W10 505 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 GATAD2AQ86YP4 633 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR4C15Q8NGM1 316 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 ADAMTS15Q8TE58 950 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 CCDC74AQ96AQ1 378 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 CTHRC1Q96CG8 243 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLC41A2Q96JW4 573 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms