RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DUXAA6NLW8 204 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 RCBTB2O95199 551 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 HTR1AP08908 422 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 GNSP15586 552 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 MBTPS1Q14703 1052 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 LRIF1Q5T3J3 769 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 FAM180AQ6UWF9 173 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 OR8J2Q8NGG1 315 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 ASB12Q8WXK4 309 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 RERGQ96A58 199 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF514Q96K75 400 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 SCN1AP35498 2009 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 A0A1W2PRQ8 180 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 URADA6NGE7 173 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 FABP7O15540 132 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 HOXC11O43248 304 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 CSO75390 466 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 GIPRP48546 466 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 SGSHP51688 502 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 IFITM3Q01628 133 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 OR4F15Q8NGB8 312 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 ACTL8Q9H568 366 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 UPK1AO00322 258 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 PRKYO43930 277 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 FMO6PO60774 539 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 PRR35P0CG20 571 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 SOX2P48431 317 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 HOXC5Q00444 222 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF234Q14588 700 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 CLLU1OSQ5K130 101 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 NXNL2Q5VZ03 156 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 NXPE4Q6UWF7 544 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 CPOQ8IVL8 374 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 NLGN3Q9NZ94 848 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 DEC1Q9P2X7 70 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF639Q9UID6 485 aa12.48□□□□□ -0.41
TRAPPC9-201ENST00000389328 PRODHO43272 600 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 RGS9O75916 674 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 IDSP22304 550 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 BMP8BP34820 402 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 GJA5P36382 358 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 NAA10P41227 235 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 FKBP1BP68106 108 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 TPGS2Q68CL5 300 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PODNL1Q6PEZ8 512 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 BMP8AQ7Z5Y6 402 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 CHST4Q8NCG5 386 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 OR8K3Q8NH51 312 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 TRMT10AQ8TBZ6 339 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SPRYD4Q8WW59 207 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 C1QTNF3Q9BXJ4 246 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC6A15Q9H2J7 730 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 XKR8Q9H6D3 395 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 MUTYHQ9UIF7 546 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF879B4DU55 563 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 GTPBP1O00178 669 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PDCD5O14737 125 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SSX4O60224 188 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 TSPAN12O95859 305 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 IGLV3-25P01717 112 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ARSBP15848 533 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 CTBP2P56545 445 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 NRMQ8IXM6 262 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF676Q8N7Q3 588 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 FKBP10Q96AY3 582 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 OTUB2Q96DC9 234 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC35C2Q9NQQ7 365 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PADI2Q9Y2J8 665 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC27A6Q9Y2P4 619 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PCDHGB1Q9Y5G3 927 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 GIFP27352 417 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PITPNBP48739 271 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ID2Q02363 134 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC14A1Q13336 389 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 BAK1Q16611 211 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 CDKL4Q5MAI5 379 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 VRK3Q8IV63 474 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 BBS10Q8TAM1 723 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ADAMTS19Q8TE59 1207 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 FBXO9Q9UK97 447 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 IFNA6P05013 189 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PCMT1P22061 227 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 DDX6P26196 483 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 VSX2P58304 361 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 BTN3A2P78410 334 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms