RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 APH1AQ96BI3 265 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 MBOAT7Q96N66 472 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 DKK3Q9UBP4 350 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TPRKBQ9Y3C4 175 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 OTOL1A6NHN0 477 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 FOXO6A8MYZ6 492 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 LOC730098B7Z3J9 87 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 RGS10O43665 173 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 H6PDO95479 791 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CERS1P27544 350 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 SLC6A8P48029 635 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 RAB2AP61019 212 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 SLC3A1Q07837 685 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 SEC23BQ15437 767 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TRIM16LQ309B1 348 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 C3P1Q6ZMU1 363 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 QSOX2Q6ZRP7 698 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 LAS2Q8IYD9 372 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 GALNT16Q8N428 558 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 C22orf15Q8WYQ4 148 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 RSC1A1Q92681 617 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 RFKQ969G6 155 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 ADOQ96SZ5 270 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 WDR83Q9BRX9 315 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TAS2R10Q9NYW0 307 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 EFR3BQ9Y2G0 817 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 LGALS8O00214 317 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 LGI1O95970 557 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 EPOP01588 193 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 IDUAP35475 653 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 GLP1RP43220 463 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 GALNT2Q10471 571 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 IHHQ14623 411 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 ADRM1Q16186 407 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TMEM176BQ3YBM2 270 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 ACSBG2Q5FVE4 666 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 MEX3BQ6ZN04 569 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CMTM4Q8IZR5 234 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 EHD1Q9H4M9 534 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TCF7L1Q9HCS4 588 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TAGLN3Q9UI15 199 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 LAMP5Q9UJQ1 280 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 NHSL1Q5SYE7 1610 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 H0YAE9 185 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 H0YGG7 62 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CST1P01037 141 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 PRF1P14222 555 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 RAC2P15153 192 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 AFF1P51825 1210 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 ARF3P61204 181 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CLEC6AQ6EIG7 209 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 THOC7Q6I9Y2 204 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 ZBTB49Q6ZSB9 765 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 DEFB107AQ8IZN7 70 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TRIM63Q969Q1 353 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 TMEM138Q9NPI0 162 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 CLEC4AQ9UMR7 237 aa8.72□□□□□ -1.01
LIMCH1-202ENST00000381753 M0R129 80 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 TNFRSF11BO00300 401 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 DNAJB6O75190 326 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 PPP1R37O75864 691 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 PDYNP01213 254 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 IL1AP01583 271 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 IL3RAP26951 378 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 CDKN2BP42772 138 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 HTR3AP46098 478 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 LEPRP48357 1165 aaKnown RBP8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 ILKQ13418 452 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 SLC25A25Q6KCM7 469 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 CLEC2AQ6UVW9 174 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 HACD2Q6Y1H2 254 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 VWA5B2Q8N398 1253 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 RNF148Q8N7C7 305 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 GAL3ST3Q96A11 431 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 COG8Q96MW5 612 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 SALL4Q9UJQ4 1053 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 PRPF19Q9UMS4 504 aaKnown RBP8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 GMPPBQ9Y5P6 360 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 IGHV3-20A0A0C4DH32 117 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 C17orf113A0A1B0GUU1 675 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 LMO7DNF2Z398 122 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 RAD51DO75771 328 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 ITGB2P05107 769 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 JAM2P57087 298 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 ARPC4P59998 168 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 TBC1D28Q2M2D7 210 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 WSCD2Q2TBF2 565 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 SPDYCQ5MJ68 293 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 ATAD3CQ5T2N8 411 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 C10orf62Q5T681 223 aaPredicted RBP8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 AENQ8WTP8 325 aaKnown RBP8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 KISS1RQ969F8 398 aaPredicted RBP8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 INSM2Q96T92 566 aaPredicted RBP8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 MICU1Q9BPX6 476 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 RAB1BQ9H0U4 201 aa8.71□□□□□ -1.01
LIMCH1-202ENST00000381753 NRG2O14511 850 aaPredicted RBP8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 AP1G1O43747 822 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 LDB3O75112 727 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms