RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 DNASE1P24855 282 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 DUSP3P51452 185 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 PER3P56645 1201 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 NFATC3Q12968 1075 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 METTL2BQ6P1Q9 378 aaKnown RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 LRRTM3Q86VH5 581 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 CD200R1Q8TD46 325 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 APIPQ96GX9 242 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 MTHFD2LQ9H903 347 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 OR2B3O76000 313 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 SYNGR4O95473 234 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 ZNF16P17020 682 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 STT3AP46977 705 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 AIMP2Q13155 320 aaKnown RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 NKAPLQ5M9Q1 402 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 LETMD1Q6P1Q0 360 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 PXYLP1Q8TE99 480 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 ARHGAP39Q9C0H5 1083 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 TP63Q9H3D4 680 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 DUX1O43812 170 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 CDC40O60508 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 JMJD7P0C870 316 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 JUNDP17535 347 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 SIM1P81133 766 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 ZNF789Q5FWF6 425 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 TMEM25Q86YD3 366 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 FKBP10Q96AY3 582 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 PTERQ96BW5 349 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 RHBDF1Q96CC6 855 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 TGM7Q96PF1 710 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 HDHD5Q9BXW7 423 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 ANKRD60Q9BZ19 345 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 APOBEC3BQ9UH17 382 aaKnown RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 GPR34Q9UPC5 381 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 SLC7A11Q9UPY5 501 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 OSMP13725 252 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 CAPZA1P52907 286 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 CTBP2P56545 445 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 FAM189BP81408 668 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 RUNX3Q13761 415 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 LSM14AQ8ND56 463 aaKnown RBP15.28■□□□□ 0.04
COL2A1-202ENST00000380518 BCL7BQ9BQE9 202 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 CCDC32Q9BV29 185 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 ACOT13Q9NPJ3 140 aa15.28■□□□□ 0.04
COL2A1-202ENST00000380518 BORCS7-ASMTA0A0B4J1R7 106 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 NPC1O15118 1278 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 GPR37L1O60883 481 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 H2AFB2P0C5Z0 115 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 CNR2P34972 360 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 MAGEA6P43360 314 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 RIDAP52758 137 aaKnown RBP15.27■□□□□ 0.04
COL2A1-202ENST00000380518 SCD5Q86SK9 330 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 ALDH16A1Q8IZ83 802 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 OR2T4Q8NH00 348 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 KIAA1143Q96AT1 154 aaPredicted RBP15.27■□□□□ 0.04
COL2A1-202ENST00000380518 SYT4Q9H2B2 425 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 GRXCR2A6NFK2 248 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 UCHL1P09936 223 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 ADRB3P13945 408 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 NTSR1P30989 418 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 RNF144AP50876 292 aaPredicted RBP15.27■□□□□ 0.04
COL2A1-202ENST00000380518 PPP5CP53041 499 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 MS4A2Q01362 244 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 RGNQ15493 299 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 UAP1L1Q3KQV9 507 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 NDUFAF5Q5TEU4 345 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 KDELC1Q6UW63 502 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 ARSKQ6UWY0 536 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 OR4N5Q8IXE1 308 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 MAL2Q969L2 176 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 PELI2Q9HAT8 420 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.04
COL2A1-202ENST00000380518 TRAPPC13A5PLN9 417 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 RFPL2O75678 378 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 DCTP40126 519 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 FNTBP49356 437 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 SELENOVP59797 346 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 GTDC1Q4AE62 458 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 DTWD1Q8N5C7 304 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 CHST14Q8NCH0 376 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 NETO1Q8TDF5 533 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 NEDD4LQ96PU5 975 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 GPR174Q9BXC1 333 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 PCDH10Q9P2E7 1040 aa15.27■□□□□ 0.04
COL2A1-202ENST00000380518 MITFO75030 526 aaPredicted RBP15.27■□□□□ 0.03
COL2A1-202ENST00000380518 CD3GP09693 182 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 BMXP51813 675 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 LRRC37A5PQ49AS3 106 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 ALG10BQ5I7T1 473 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 ANKRD13BQ86YJ7 626 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 OR7G3Q8NG95 312 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 BMFQ96LC9 184 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 ENY2Q9NPA8 101 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 KLHL21Q9UJP4 597 aa15.27■□□□□ 0.03
COL2A1-202ENST00000380518 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 F5H0A9 414 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 AFF1P51825 1210 aaKnown RBP15.26■□□□□ 0.03
COL2A1-202ENST00000380518 NTRK2Q16620 822 aa15.26■□□□□ 0.03
COL2A1-202ENST00000380518 PROX2Q3B8N5 592 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms