RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ZNF10P21506 573 aaPredicted RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 NR4A1P22736 598 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ELAVL4P26378 380 aaKnown RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 SPCS2Q15005 226 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 GPR19Q15760 415 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 TBCEQ15813 527 aaPredicted RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 LINC00299Q6ZSB3 139 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 VANGL1Q8TAA9 524 aaPredicted RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 UCK2Q9BZX2 261 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 PALMDQ9NP74 551 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 FKBP14Q9NWM8 211 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ZNF226Q9NYT6 803 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 LIPT1Q9Y234 373 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 NINQ8N4C6 2090 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 A6NCN8 305 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 WASHC1A8K0Z3 465 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 M0R3G1 203 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 OR10H3O60404 316 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 MAN1A2O60476 641 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 CDK1P06493 297 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 OSMP13725 252 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 GABRB1P18505 474 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ENDOUP21128 410 aaKnown RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 CHMP24386 653 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 LTBRP36941 435 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 BMXP51813 675 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 UGT2B15P54855 530 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 RPS3AP61247 264 aaKnown RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 DGCR6Q14129 220 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 PRRT3Q5FWE3 981 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 VN1R4Q7Z5H5 301 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 FAM46DQ8NEK8 389 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 CCL4L1Q8NHW4 92 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 EFHD2Q96C19 240 aaPredicted RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 GDF15Q99988 308 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 RHNO1Q9BSD3 238 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ITPAQ9BY32 194 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 MMP17Q9ULZ9 603 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 TRBV4-1A0A0J9YWV2 114 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 PRAMEF27A3QJZ7 478 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TNFP01375 233 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 GLULP15104 373 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TLX1P31314 330 aaPredicted RBP11.88□□□□□ -0.51
VPS16-202ENST00000380445 RABIFP47224 123 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 OCA2Q04671 838 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ILKQ13418 452 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 GPAT3Q53EU6 434 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ATAD3BQ5T9A4 648 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 CCDC103Q8IW40 242 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 STX19Q8N4C7 294 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 KCT2Q8NC54 265 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 NUP43Q8NFH3 380 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TRUB1Q8WWH5 349 aaKnown RBP11.88□□□□□ -0.51
VPS16-202ENST00000380445 NR4A3Q92570 626 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 GGHQ92820 318 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ELP4Q96EB1 424 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 SERINC2Q96SA4 455 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 PINK1Q9BXM7 581 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TRIM45Q9H8W5 580 aaPredicted RBP11.88□□□□□ -0.51
VPS16-202ENST00000380445 PRDM9Q9NQV7 894 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 CLN6Q9NWW5 311 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 MS4A12Q9NXJ0 267 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 FTSJ1Q9UET6 329 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ENTPD2Q9Y5L3 495 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 DSPPQ9NZW4 1301 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TRBV23OR9-2A0A075B6M9 112 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 A0A1W2PRQ8 180 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 DUXAA6NLW8 204 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 CLDN24A6NM45 220 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 AQP9O43315 295 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 SEMA4FO95754 770 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ZNF888P0CJ79 500 aaPredicted RBP11.88□□□□□ -0.51
VPS16-202ENST00000380445 C8orf89P0DMQ9 161 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 SERPINB10P48595 397 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TCEA2Q15560 299 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 KCNJ8Q15842 424 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 NDUFA5Q16718 116 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ALG11Q2TAA5 492 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 FBXO42Q6P3S6 717 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 PTCHD4Q6ZW05 846 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 CAMKVQ8NCB2 501 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 NACC2Q96BF6 587 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TM4SF19Q96DZ7 209 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 ZNF681Q96N22 645 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 OR2A14Q96R47 310 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 FNDC11Q9BVV2 318 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 TWSG1Q9GZX9 223 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 KCNK12Q9HB15 430 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 CD207Q9UJ71 328 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 F5P12259 2224 aa11.88□□□□□ -0.51
VPS16-202ENST00000380445 FAM221BA6H8Z2 402 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 EFCAB10A6NFE3 127 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 PRAMEF26H0Y7S4 382 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms