RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ARL6Q9H0F7 186 aa8.9□□□□□ -0.99
PTPRA-204ENST00000380393 FN3KQ9H479 309 aa8.9□□□□□ -0.99
PTPRA-204ENST00000380393 BEX1Q9HBH7 125 aa8.9□□□□□ -0.99
PTPRA-204ENST00000380393 VNN3Q9NY84 501 aa8.9□□□□□ -0.99
PTPRA-204ENST00000380393 CCDC163A0A0D9SF12 145 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 SGK494L7N484 410 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 PRAMEF2O60811 474 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 VTNP04004 478 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 CD2P06729 351 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 ELNP15502 786 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 UQCRC2P22695 453 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 S100A11P31949 105 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 NAE1Q13564 534 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 ARHGAP15Q53QZ3 475 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 SGO1Q5FBB7 561 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF667Q5HYK9 610 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 OTUD1Q5VV17 481 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 B3GNTL1Q67FW5 361 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 C19orf48Q6RUI8 117 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 DEF8Q6ZN54 512 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM185AQ8NFB2 350 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 OR10Q1Q8NGQ4 319 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 ACOT11Q8WXI4 607 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 AP3S1Q92572 193 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 EXT2Q93063 718 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 FAM122AQ96E09 287 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 PHF21BQ96EK2 531 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 C12orf42Q96LP6 360 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF599Q96NL3 588 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 CDCA3Q99618 268 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 SEMA6CQ9H3T2 930 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 LHX9Q9NQ69 397 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 PLEKHB1Q9UF11 243 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 ASPDHA6ND91 283 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM189-UBE2V1I3L0A0 370 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 RFXAPO00287 272 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 CNMDO75829 334 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 MATN4O95460 622 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 OR8G3PP0DMU2 310 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 HGFP14210 728 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 GABRA1P14867 456 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 GKP32189 559 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 DCDP81605 110 aaKnown RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 NTRK2Q16620 822 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 CPZQ66K79 652 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 H3F3CQ6NXT2 135 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 Q6ZPB1 254 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 MON1AQ86VX9 555 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 RHBDF1Q96CC6 855 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 RAB3CQ96E17 227 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 RAD18Q9NS91 495 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 PDP1Q9P0J1 537 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 KLHL8Q9P2G9 620 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 OR10H1Q9Y4A9 318 aa8.89□□□□□ -0.99
PTPRA-204ENST00000380393 COL11A1P12107 1806 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-204ENST00000380393 GNG14A0A1W2PPG7 69 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SPDEFO95238 335 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 IFNA2P01563 188 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 HNF1AP20823 631 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 XPAP23025 273 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 HOXA9P31269 272 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 NPBWR1P48145 328 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 IDH2P48735 452 aaKnown RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 EPHA4P54764 986 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 BLOC1S1P78537 153 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 MAD2L1Q13257 205 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 BIKQ13323 160 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ST3GAL2Q16842 350 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF628Q5EBL2 1059 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SPANXN3Q5MJ09 141 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 LBX2Q6XYB7 198 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 TIPARPQ7Z3E1 657 aaKnown RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF605Q86T29 641 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PDZD3Q86UT5 571 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 OR2T12Q8NG77 320 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 MED8Q96G25 268 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SIK2Q9H0K1 926 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SDR39U1Q9NRG7 319 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 POFUT2Q9Y2G5 429 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 WDR90Q96KV7 1748 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ABHD14A-ACY1A0A1B0GW23 586 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 BCLAF3A2AJT9 711 aaKnown RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 DIRAS3O95661 229 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 TFP02787 698 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 QDPRP09417 244 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SLC35E2BP0CK96 405 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 RNH1P13489 461 aaKnown RBP8.88□□□□□ -0.99
PTPRA-204ENST00000380393 FOLR2P14207 255 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 SDHBP21912 280 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 ITPKAP23677 461 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 DIO3P55073 304 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PKIAP61925 76 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 PPP3R1P63098 170 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 NPRL3Q12980 569 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 FAM189A2Q15884 450 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 GSG1LQ6UXU4 331 aa8.88□□□□□ -0.99
PTPRA-204ENST00000380393 KDELC2Q7Z4H8 507 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms