RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 HNRNPCL4P0DMR1 293 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 ETS2P15036 469 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 CDH2P19022 906 aaPredicted RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 HMGA2P52926 109 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 RAB38P57729 211 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 MEP1AQ16819 746 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 TRMT12Q53H54 448 aaKnown RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 OR2L13Q8N349 312 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 SLC25A45Q8N413 288 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 SLC5A8Q8N695 610 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 TTC29Q8NA56 475 aaPredicted RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 OR10G2Q8NGC3 310 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 MAFAQ8NHW3 353 aaPredicted RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 SLC35A4Q96G79 324 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 WFDC6Q9BQY6 131 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 IER2Q9BTL4 223 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 EPB41L1Q9H4G0 881 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 NDUFA13Q9P0J0 144 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 VCANP13611 3396 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 TRIM64CA6NLI5 447 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 B4GAT1O43505 415 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 CHST10O43529 356 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 GADD45GO95257 159 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 EPHA2P29317 976 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 LIMS1P48059 325 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 GABRA4P48169 554 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 FNTBP49356 437 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 CD47Q08722 323 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 IL18R1Q13478 541 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 RAPSNQ13702 412 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 CTU2Q2VPK5 515 aaKnown RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 ZNF628Q5EBL2 1059 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 MFSD12Q6NUT3 480 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 MAMSTRQ6ZN01 415 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 HMGN2P46Q86SG4 172 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 RBM45Q8IUH3 476 aaKnown RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 SLC16A11Q8NCK7 471 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 OR4D11Q8NGI4 311 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 VANGL1Q8TAA9 524 aaPredicted RBP18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 DOK4Q8TEW6 326 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 MS4A4EQ96PG1 132 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 SPATA5L1Q9BVQ7 753 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 RLIMQ9NVW2 624 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 PTGFRNQ9P2B2 879 aa18.61■□□□□ 0.57
PDLIM5-205ENST00000380180 A0A0A6YYC8 382 aaPredicted RBP18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 TLCD2A6NGC4 264 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 I3L1I5 382 aaPredicted RBP18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 SEMA7AO75326 666 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 BMP10O95393 424 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 PDGFBP01127 241 aaPredicted RBP18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 ATP1B1P05026 303 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 IL7RP16871 459 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 RYKP34925 604 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 FOXD4Q12950 439 aaPredicted RBP18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 TCTN3Q6NUS6 607 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 COMTD1Q86VU5 262 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 LACC1Q8IV20 430 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 CHDHQ8NE62 594 aaPredicted RBP18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 ADAMTS15Q8TE58 950 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 BTBD2Q9BX70 525 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 YIPF3Q9GZM5 350 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 RAB33BQ9H082 229 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 ADNPQ9H2P0 1102 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 SOHLH2Q9NX45 425 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 LIPT1Q9Y234 373 aa18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 TNRC6BQ9UPQ9 1833 aaKnown RBP18.6■□□□□ 0.57
PDLIM5-205ENST00000380180 FOXS1O43638 330 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 MLLT3P42568 568 aaPredicted RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 EPHA4P54764 986 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 NPRL3Q12980 569 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 C6orf141Q5SZD1 244 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ATAD3BQ5T9A4 648 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 PRAMEF8Q5VWM4 474 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 PRAMEF7Q5VXH5 474 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 PHF10Q8WUB8 498 aaKnown RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ANKRD9Q96BM1 317 aaPredicted RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 QRSL1Q9H0R6 528 aaKnown RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 SLC38A1Q9H2H9 487 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ERVMER34-1Q9H9K5 563 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 GIN1Q9NXP7 522 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 EPHA6Q9UF33 1036 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 KLHL3Q9UH77 587 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 KCND3Q9UK17 655 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 PLCL2Q9UPR0 1127 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 DUXAA6NLW8 204 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ANXA8P13928 327 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ALDH3B2P48448 385 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 OR1D5P58170 312 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 KEAP1Q14145 624 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 FHL5Q5TD97 284 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 LAIR2Q6ISS4 152 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 CDC73Q6P1J9 531 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 DEF8Q6ZN54 512 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 C16orf62Q7Z3J2 963 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ADAMTS16Q8TE57 1224 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 SLC9A6Q92581 669 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 HDAC2Q92769 488 aaKnown RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 ZDHHC12Q96GR4 267 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 TRNT1Q96Q11 434 aaKnown RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 PDE7BQ9NP56 450 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms