RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 ENDOUP21128 410 aaKnown RBP8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ITGB7P26010 798 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 GPR1P46091 355 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 AVPR1BP47901 424 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 RNF144AP50876 292 aaPredicted RBP8.24□□□□□ -1.09
TRIM6-203ENST00000380107 GPLD1P80108 840 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
TRIM6-203ENST00000380107 TATDN3Q17R31 274 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ZNF805Q5CZA5 627 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 SLC35F1Q5T1Q4 408 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 DDI2Q5TDH0 399 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 MEDAGQ5VYS4 303 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 CNIH2Q6PI25 160 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ADCK2Q7Z695 626 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 TRIM69Q86WT6 500 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 SFTPA1Q8IWL2 248 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 VWA5B2Q8N398 1253 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 YIPF7Q8N8F6 280 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ZNF557Q8N988 423 aaPredicted RBP8.24□□□□□ -1.09
TRIM6-203ENST00000380107 SMPDL3AQ92484 453 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 TIFAQ96CG3 184 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ART5Q96L15 291 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 KCTD7Q96MP8 289 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 FRMD6Q96NE9 622 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 FNDC11Q9BVV2 318 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 ZDHHC5Q9C0B5 715 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 RNF121Q9H920 327 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 LHX9Q9NQ69 397 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 RPRD1BQ9NQG5 326 aaKnown RBP8.24□□□□□ -1.09
TRIM6-203ENST00000380107 MAN2C1Q9NTJ4 1040 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 KCNE3Q9Y6H6 103 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 AP1M2Q9Y6Q5 423 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 COL4A6Q14031 1691 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
TRIM6-203ENST00000380107 MDC1Q14676 2089 aaKnown RBP8.24□□□□□ -1.09
TRIM6-203ENST00000380107 LOC102723532A0A0G2JNH3 316 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 CD8B2A6NJW9 211 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 PITPNM1O00562 1244 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SCAMP1O15126 338 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 POLR1CO15160 346 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SPINT1O43278 529 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 LATO43561 262 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 HRO43593 1189 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ERAL1O75616 437 aaKnown RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 CD8BP10966 210 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 HOXB3P14651 431 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 MYL12AP19105 171 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 BSGP35613 385 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SLC6A11P48066 632 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ALDH6A1Q02252 535 aaKnown RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 E2F2Q14209 437 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZNF791Q3KP31 576 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZNF658BQ4V348 819 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 TCEAL5Q5H9L2 206 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 TMEM201Q5SNT2 666 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 KIAA1161Q6NSJ0 714 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 Q8N402 240 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 OR8D4Q8NGM9 314 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZFPM2Q8WW38 1151 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ING5Q8WYH8 240 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZNF689Q96CS4 500 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ARSGQ96EG1 525 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZBED6CLQ96FA7 236 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZSWIM3Q96MP5 696 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 WDFY2Q96P53 400 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 GDF15Q99988 308 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 A4GALTQ9NPC4 353 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 EQTNQ9NQ60 294 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SPHK2Q9NRA0 654 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SLC23A2Q9UGH3 650 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SPTBP11277 2137 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 A0A0G2JMP0 313 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 A0A0X1KG70 313 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 GSAPA4D1B5 854 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ARRDC5A6NEK1 342 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 WASH3PC4AMC7 463 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 LCMT2O60294 686 aaKnown RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SRPRAP08240 638 aaKnown RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SLC2A2P11168 524 aaPredicted RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 IFI30P13284 250 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 CPEP16870 476 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SLC9A3P48764 834 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 GAS1P54826 345 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 CTBP2P56545 445 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 WNT4P56705 351 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ASAH1Q13510 395 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 IL18Q14116 193 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 EFR3AQ14156 821 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 LRRC32Q14392 662 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 LASP1Q14847 261 aaKnown RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 QPRTQ15274 297 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 ZNF697Q5TEC3 545 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 KHDRBS2Q5VWX1 349 aaKnown RBP8.23□□□□□ -1.09
TRIM6-203ENST00000380107 SLC30A6Q6NXT4 461 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 XKRXQ6PP77 449 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 DPPA4Q7L190 304 aa8.23□□□□□ -1.09
TRIM6-203ENST00000380107 KLHDC8AQ8IYD2 350 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms