RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RTCAO00442 366 aaKnown RBP7.1□□□□□ -1.27
CDKL5-201ENST00000379989 TNFRSF10BO14763 440 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 VPS4BO75351 444 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 B3GAT3O94766 335 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 DIRAS1O95057 198 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 IL1AP01583 271 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 MBP02144 154 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 SCG5P05408 212 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 C4BPBP20851 252 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 FABP9Q0Z7S8 132 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 GUCA2BQ16661 112 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 ST3GAL2Q16842 350 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 DEFB115Q30KQ5 88 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 SYTL3Q4VX76 610 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 UNC50Q53HI1 259 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF678Q5SXM1 525 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 CERCAMQ5T4B2 595 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF852Q6ZMS4 543 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 BHLHA9Q7RTU4 235 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 B3GNT7Q8NFL0 401 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 OR52E4Q8NGH9 312 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 TADA1Q96BN2 335 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 P2RY11Q96G91 374 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 TSNAXQ99598 290 aaKnown RBP7.1□□□□□ -1.27
CDKL5-201ENST00000379989 APOL2Q9BQE5 337 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 IKZF5Q9H5V7 419 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 EXOSC3Q9NQT5 275 aaKnown RBP7.1□□□□□ -1.27
CDKL5-201ENST00000379989 MPP6Q9NZW5 540 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 STUB1Q9UNE7 303 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 CHST2Q9Y4C5 530 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 PLEKHM1Q9Y4G2 1056 aa7.1□□□□□ -1.27
CDKL5-201ENST00000379989 CXCL10P02778 98 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 CBSLP0DN79 551 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 RHOQP17081 205 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 PSMA1P25786 263 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 NMBRP28336 390 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 CD52P31358 61 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 CBSP35520 551 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 CASP9P55211 416 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 RAB5BP61020 215 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 DHODHQ02127 395 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 SKP2Q13309 424 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 HLXQ14774 488 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 SYPL2Q5VXT5 272 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 KCTD11Q693B1 232 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 OR2T5Q6IEZ7 315 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 PLBD1Q6P4A8 553 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 SEZ6L2Q6UXD5 910 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 CD300LGQ6UXG3 332 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF783Q6ZMS7 281 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 GPR149Q86SP6 731 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 RNF113BQ8IZP6 322 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 UMODL1-AS1Q8N2C9 162 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 PLA2G15Q8NCC3 412 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 GPR150Q8NGU9 434 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 OR2T29Q8NH02 315 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 NUDT8Q8WV74 236 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 HSD17B8Q92506 261 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 KCNC2Q96PR1 638 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 GGACTQ9BVM4 153 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 SAP130Q9H0E3 1048 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 DDIT4Q9NX09 232 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 COMMD3Q9UBI1 195 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 IGLV3-10A0A075B6K4 115 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 MYADML2A6NDP7 307 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 AZIN1O14977 448 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 KIAA0355O15063 1070 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 ADAMDEC1O15204 470 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 MATN3O15232 486 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 CD3EAPO15446 510 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 LANCL1O43813 399 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 LCMT2O60294 686 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 FKTNO75072 461 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 HCKP08631 526 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 ALPIP09923 528 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 GOT1P17174 413 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 GGT2P36268 569 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 MMP12P39900 470 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 MRPL19P49406 292 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 GNG10P50151 68 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 AFF1P51825 1210 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 STARD6P59095 220 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 HNRNPKP61978 463 aaKnown RBP eCLIP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 TLE2Q04725 743 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 RBBP4Q09028 425 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 C3orf38Q5JPI3 329 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 UNQ6494/PRO21346Q6UXR6 183 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 NETO2Q8NC67 525 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 TMIEQ8NEW7 156 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 BEST4Q8NFU0 473 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 OR5M9Q8NGP3 310 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 PROKR1Q8TCW9 393 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 MISP3Q96FF7 219 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 PIWIL1Q96J94 861 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 HBEGFQ99075 208 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms