RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 KLHL28Q9NXS3 571 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 KLRF1Q9NZS2 232 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 NDRG3Q9UGV2 375 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 SNX12Q9UMY4 172 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 ASB4Q9Y574 426 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 A0A0A6YYD5 115 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 SEC31AO94979 1220 aaKnown RBP16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 ACTL6AO96019 429 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 SLC35E2BP0CK96 405 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 SLC35E2P0CK97 266 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 CNTFP26441 200 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 ABCD3P28288 659 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 SSTR1P30872 391 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 STARP49675 285 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 SLMAPQ14BN4 828 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 OR52E8Q6IFG1 317 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 GRAMD2AQ8IUY3 354 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 CDKL2Q92772 493 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 PIK3IP1Q96FE7 263 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 FAM111AQ96PZ2 611 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 ZNF717Q9BY31 904 aaPredicted RBP16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 NXF5Q9H1B4 397 aaKnown RBP16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 ADGRE2Q9UHX3 823 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 DTX4Q9Y2E6 619 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 TESMINQ9Y4I5 508 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 IKBKGQ9Y6K9 419 aa16.18■□□□□ 0.18
PDLIM4-202ENST00000379018 PGRMC2O15173 223 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 BSGP35613 385 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 ARL1P40616 181 aaPredicted RBP16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 PIK3CBP42338 1070 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 PIK3CGP48736 1102 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 DIO3P55073 304 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 RAB10P61026 200 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 CPSF6Q16630 551 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 MRM1Q6IN84 353 aaKnown RBP16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 CMC1Q7Z7K0 106 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 TRIM42Q8IWZ5 723 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 STAG3L4Q8TBR4 150 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 PIGTQ969N2 578 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 ADIPOR1Q96A54 375 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 NODALQ96S42 347 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 SECISBP2Q96T21 854 aaKnown RBP16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 GPR22Q99680 433 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 RBBP8Q99708 897 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 BDH2Q9BUT1 245 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 BRINP2Q9C0B6 783 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 ACTR8Q9H981 624 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 PACSIN3Q9UKS6 424 aa16.17■□□□□ 0.18
PDLIM4-202ENST00000379018 DSCAMO60469 2012 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 SIAH2O43255 324 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 PPM1BO75688 479 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 RCBTB2O95199 551 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 ABCB1P08183 1280 aaPredicted RBP16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 GPX3P22352 226 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 PTX3P26022 381 aaPredicted RBP16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 NEK2P51955 445 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 FAM27E3Q08E93 113 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 PLCXD2Q0VAA5 305 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 DLG1Q12959 904 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 E2F2Q14209 437 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 ENPP6Q6UWR7 440 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 P4HA3Q7Z4N8 544 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 NUDT13Q86X67 352 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 CTAGE3PQ8IX95 158 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 ZNF615Q8N8J6 731 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 CNEP1R1Q8N9A8 125 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 SIMC1Q8NDZ2 872 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 PYROXD1Q8WU10 500 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 UBTD2Q8WUN7 234 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 ZC3HAV1LQ96H79 300 aaKnown RBP16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 ZFP3Q96NJ6 502 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 CPNE1Q99829 537 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 MED18Q9BUE0 208 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 PIGMQ9H3S5 423 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 BCAP29Q9UHQ4 241 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 WIF1Q9Y5W5 379 aa16.16■□□□□ 0.18
PDLIM4-202ENST00000379018 LRRC14BA6NHZ5 514 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 KERAO60938 352 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 ICOSLGO75144 302 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 GALNSP34059 522 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 XKP51811 444 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 MRPS25P82663 173 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 FUT7Q11130 342 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 EXOSC7Q15024 291 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 CXXC5Q7LFL8 322 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 TBC1D1Q86TI0 1168 aaPredicted RBP16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 IFNEQ86WN2 208 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 HEATR5AQ86XA9 2040 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 LRRC75A-AS1Q8N1F1 130 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 OR4K14Q8NGD5 310 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 WNT2BQ93097 391 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 OMA1Q96E52 524 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 UBXN10Q96LJ8 280 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 WFIKKN1Q96NZ8 548 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 PIGQQ9BRB3 760 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 ITPAQ9BY32 194 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 ACBD3Q9H3P7 528 aa16.15■□□□□ 0.18
PDLIM4-202ENST00000379018 DDX31Q9H8H2 851 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms