RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.49■□□□□ 0.07
HMGN4-201ENST00000377575 NCKAP5O14513 1909 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 NINQ8N4C6 2090 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 PRSS44E7EML9 344 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 E9PLN8 166 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ZNHIT1O43257 154 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 BCAS2O75934 225 aaPredicted RBP15.48■□□□□ 0.07
HMGN4-201ENST00000377575 PDE9AO76083 593 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 CHEK2O96017 543 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 DDCP20711 480 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 AGAP20933 346 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 S1PR1P21453 382 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 COL8A1P27658 744 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 DCTP40126 519 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 MAGEA5P43359 124 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ADORA2A-AS1P86434 159 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 DUSP2Q05923 314 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 MGAT2Q10469 447 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 FOXO1Q12778 655 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ART3Q13508 389 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 EXOSC7Q15024 291 aaKnown RBP15.48■□□□□ 0.07
HMGN4-201ENST00000377575 CLEC6AQ6EIG7 209 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 FAM180BQ6P0A1 224 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 XKRXQ6PP77 449 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 FAM111BQ6SJ93 734 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 DOLPP1Q86YN1 238 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 MREGQ8N565 214 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 TMEM251Q8N6I4 163 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 OR52R1Q8NGF1 315 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 DIO2Q92813 273 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 CTHRC1Q96CG8 243 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ERP27Q96DN0 273 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 METTL2AQ96IZ6 378 aaKnown RBP15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF597Q96LX8 424 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 PHF12Q96QT6 1004 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 SECISBP2Q96T21 854 aaKnown RBP15.48■□□□□ 0.07
HMGN4-201ENST00000377575 VKORC1Q9BQB6 163 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 DOHHQ9BU89 302 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ZFP64Q9NPA5 681 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 SLC35C2Q9NQQ7 365 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 SENP1Q9P0U3 644 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 B4GALT7Q9UBV7 327 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF639Q9UID6 485 aa15.48■□□□□ 0.07
HMGN4-201ENST00000377575 WBP11Q9Y2W2 641 aaKnown RBP15.48■□□□□ 0.07
HMGN4-201ENST00000377575 KLF2Q9Y5W3 355 aaPredicted RBP15.48■□□□□ 0.07
HMGN4-201ENST00000377575 CRYBG3Q68DQ2 2970 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 OR14I1A6ND48 311 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ESPNB1AK53 854 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 SLC28A1O00337 649 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 AZIN1O14977 448 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ACOX3O15254 700 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 RGS14O43566 566 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 CBX7O95931 251 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 IGHG3P01860 377 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 NEFHP12036 1026 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 PCSK2P16519 638 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 FBXW4P57775 412 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 DCAF7P61962 342 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 LTB4RQ15722 352 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ERCC6LQ2NKX8 1250 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF628Q5EBL2 1059 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 RNF165Q6ZSG1 346 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 IKBIPQ70UQ0 350 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 CCDC116Q8IYX3 515 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 FAM9CQ8IZT9 166 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 SLC34A3Q8N130 599 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 PHF3Q92576 2039 aaKnown RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 HSPBAP1Q96EW2 488 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 GATA5Q9BWX5 397 aaPredicted RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ITPAQ9BY32 194 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 NXF5Q9H1B4 397 aaKnown RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 TP63Q9H3D4 680 aaPredicted RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF703Q9H7S9 590 aaPredicted RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 EML4Q9HC35 981 aaKnown RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 TNFRSF12AQ9NP84 129 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 MYNNQ9NPC7 610 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 MIEF1Q9NQG6 463 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 CNOT11Q9UKZ1 510 aaKnown RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 DTX4Q9Y2E6 619 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 POLR3HQ9Y535 204 aaPredicted RBP15.47■□□□□ 0.07
HMGN4-201ENST00000377575 CACNA1CQ13936 2221 aa15.47■□□□□ 0.07
HMGN4-201ENST00000377575 ATP6AP2A0A1C7CYW4 349 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 ANKRD33BA6NCL7 494 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 NPHS1O60500 1241 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 SPAG7O75391 227 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 ATP6AP2O75787 350 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 LRATO95237 230 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 PRPH2P23942 346 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 ABCD3P28288 659 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 ALDH3A1P30838 453 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 MPIP34949 423 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 MRPS35P82673 323 aaKnown RBP15.46■□□□□ 0.07
HMGN4-201ENST00000377575 C2orf80Q0P641 193 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 DUSP8Q13202 625 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 SLC10A1Q14973 349 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 CEBPEQ15744 281 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 NNATQ16517 81 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 TRMT12Q53H54 448 aaKnown RBP15.46■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF787Q6DD87 383 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 TMEM64Q6YI46 380 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms