RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZBED5Q49AG3 693 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 PTCRAQ6ISU1 281 aaPredicted RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 PREBQ9HCU5 417 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 ETAA1Q9NY74 926 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 NUFIP1Q9UHK0 495 aaKnown RBP12.96□□□□□ -0.33
GPC6-201ENST00000377047 KLHL21Q9UJP4 597 aa12.96□□□□□ -0.33
GPC6-201ENST00000377047 HRGP04196 525 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 RHCEP18577 417 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 KDELR2P33947 212 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.34
GPC6-201ENST00000377047 ATP6AP1Q15904 470 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 C3orf33Q6P1S2 294 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.34
GPC6-201ENST00000377047 UEVLDQ8IX04 471 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 PTTG2Q9NZH5 202 aa12.96□□□□□ -0.34
GPC6-201ENST00000377047 S100A6P06703 90 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HTR1EP28566 365 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 NUDT1P36639 197 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 RIDAP52758 137 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 ERVFC1P60507 584 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CDK10Q15131 360 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 RBM12BQ8IXT5 1001 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 IL17RCQ8NAC3 791 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CIDECQ96AQ7 238 aaPredicted RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 TMEM19Q96HH6 336 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 FUZQ9BT04 418 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 WACQ9BTA9 647 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 STRA6Q9BX79 667 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SIT1Q9Y3P8 196 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 DRGXA6NNA5 263 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SLC33A1O00400 549 aaPredicted RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CLIC3O95833 236 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HOXD8P13378 290 aaPredicted RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 CFL1P23528 166 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 HK3P52790 923 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 EIF5AP63241 154 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 SH3BP2P78314 561 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ADAM17P78536 824 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CHRFAM7AQ494W8 412 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CDHR3Q6ZTQ4 885 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 TIGD4Q8IY51 512 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 OR2L2Q8NH16 312 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 FAM46AQ96IP4 442 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CA5BQ9Y2D0 317 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 KIR2DS5A0A0G2JLQ3 304 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 A0A0G2JNG1 304 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 H3BUI4 141 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 KIR2DS3K7RE56 304 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 EDN1P05305 212 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ELK4P28324 431 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ACTC1P68032 377 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ACTA1P68133 377 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HSD11B2P80365 405 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ST3GAL4Q11206 333 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 KIR2DS5Q14953 304 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 NADK2Q4G0N4 442 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HSD17B12Q53GQ0 312 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 LEG1Q6P5S2 330 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 RANBP10Q6VN20 620 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 DCP2Q8IU60 420 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 OR9A2Q8NGT5 310 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SH2B3Q9UQQ2 575 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 E2F3O00716 465 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 FASLGP48023 281 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 NOVP48745 357 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CNPY1Q3B7I2 92 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ARHGAP11AQ6P4F7 1023 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SECISBP2Q96T21 854 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 IGSF5Q9NSI5 407 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SLC39A1Q9NY26 324 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 TAS2R10Q9NYW0 307 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 ZNF224Q9NZL3 707 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 GSKIPQ9P0R6 139 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 LRIT1Q9P2V4 623 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 PCDHGB6Q9Y5F9 930 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 A0A0G2JPF8 293 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HNRNPCL3B7ZW38 293 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 EIF3FO00303 357 aaPredicted RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 HNRNPCL4P0DMR1 293 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 GJA4P35212 333 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 HNRNPA0Q13151 305 aaKnown RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 CBARPQ8N350 705 aaPredicted RBP12.95□□□□□ -0.34
GPC6-201ENST00000377047 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SLC5A8Q8N695 610 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CNIH3Q8TBE1 160 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 CD200R1Q8TD46 325 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 TAMM41Q96BW9 452 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 SLC6A15Q9H2J7 730 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 MTHFD2LQ9H903 347 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms