RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 HSD3B1P14060 373 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 BMP5P22003 454 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 HSD3B2P26439 372 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ABCD3P28288 659 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 CEACAM8P31997 349 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-204ENST00000376643 OPRM1P35372 400 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 CASP3P42574 277 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 TRPC1P48995 793 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 FBXW4P57775 412 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 MAP4K2Q12851 820 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 TIGD3Q6B0B8 471 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 VASNQ6EMK4 673 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 SLC48A1Q6P1K1 146 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ENPP6Q6UWR7 440 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 NUP54Q7Z3B4 507 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 LCA5Q86VQ0 697 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ZZZ3Q8IYH5 903 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 GBP7Q8N8V2 638 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-204ENST00000376643 OR52B6Q8NGF0 335 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 OR1J4Q8NGS1 313 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 SELENOMQ8WWX9 145 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ERP27Q96DN0 273 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 TIMP4Q99727 224 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 BRINP2Q9C0B6 783 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 CLEC4MQ9H2X3 399 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-204ENST00000376643 UBQLN3Q9H347 655 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 CALHM2Q9HA72 323 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ZDHHC18Q9NUE0 388 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ZNF180Q9UJW8 692 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 SLC12A4Q9UP95 1085 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 PCDHA9Q9Y5H5 950 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ESYT3A0FGR9 886 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 CCDC151A5D8V7 595 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 LRRC14BA6NHZ5 514 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 IL18BPO95998 194 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 KRT6AP02538 564 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 GBAP04062 536 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 KRT6BP04259 564 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 TAC1P20366 129 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 GPX3P22352 226 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 DNASE1P24855 282 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 MAGEA12P43365 314 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 KRT6CP48668 564 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 PPP2R2AP63151 447 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 SORDQ00796 357 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 PLCXD2Q0VAA5 305 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 TRAF3Q13114 568 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 FBXW10Q5XX13 1052 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 COMMD6Q7Z4G1 85 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 LIX1LQ8IVB5 337 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 ABTB1Q969K4 478 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-204ENST00000376643 TMCO6Q96DC7 493 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 LCORQ96JN0 433 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-204ENST00000376643 CDK15Q96Q40 435 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 FMO2Q99518 471 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 MRPL1Q9BYD6 325 aaKnown RBP13.5□□□□□ -0.25
HDAC6-204ENST00000376643 GIMAP4Q9NUV9 329 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 TRPS1Q9UHF7 1281 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 BCAP29Q9UHQ4 241 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 CAMK2AQ9UQM7 478 aa13.5□□□□□ -0.25
HDAC6-204ENST00000376643 ANKHD1Q8IWZ3 2542 aaKnown RBP13.49□□□□□ -0.25
HDAC6-204ENST00000376643 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 ERAL1O75616 437 aaKnown RBP13.49□□□□□ -0.25
HDAC6-204ENST00000376643 CBR3O75828 277 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 ABCB1P08183 1280 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-204ENST00000376643 RPS17P08708 135 aaKnown RBP13.49□□□□□ -0.25
HDAC6-204ENST00000376643 CYP4B1P13584 511 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 CTSSP25774 331 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 KRT20P35900 424 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 GSTM5P46439 218 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 DLX5P56178 289 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 MRPS22P82650 360 aaKnown RBP13.49□□□□□ -0.25
HDAC6-204ENST00000376643 SLC7A5Q01650 507 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 RASA2Q15283 850 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 TRADDQ15628 312 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 ZPLD1Q8TCW7 415 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 DOK4Q8TEW6 326 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 KLHL29Q96CT2 875 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 NTNG2Q96CW9 530 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 GNRHR2Q96P88 292 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 PAFAH2Q99487 392 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 SH3GL2Q99962 352 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 C1QTNF3Q9BXJ4 246 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 CXXC4Q9H2H0 198 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 RASSF1Q9NS23 344 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 KLRF1Q9NZS2 232 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 ST6GALNAC2Q9UJ37 374 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 SPG11Q96JI7 2443 aa13.49□□□□□ -0.25
HDAC6-204ENST00000376643 A0A087WUV0 522 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-204ENST00000376643 MBD3L4A6NDZ8 208 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-204ENST00000376643 MBD3L3A6NE82 208 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-204ENST00000376643 MBD3L5A6NJ08 208 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-204ENST00000376643 A6NNC1 897 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms