RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ANKRD9Q96BM1 317 aaPredicted RBP16.57■□□□□ 0.24
CTTN-203ENST00000376561 NLGN3Q9NZ94 848 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 HCN3Q9P1Z3 774 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 A0A1B0GTQ1 180 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 J3KTA2 159 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 IFNW1P05000 195 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 ETS2P15036 469 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 IGFBP5P24593 272 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 RAD23AP54725 363 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 KCNAB2Q13303 367 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 KCNAB1Q14722 419 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 GPAT3Q53EU6 434 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 KDM4DQ6B0I6 523 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 KANSL1Q7Z3B3 1105 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 WDR53Q7Z5U6 358 aaPredicted RBP16.57■□□□□ 0.24
CTTN-203ENST00000376561 ADAMTS15Q8TE58 950 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 SPRTNQ9H040 489 aaPredicted RBP16.57■□□□□ 0.24
CTTN-203ENST00000376561 TMEM9Q9P0T7 183 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 ORC6Q9Y5N6 252 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 ENPP4Q9Y6X5 453 aa16.57■□□□□ 0.24
CTTN-203ENST00000376561 UNC13CQ8NB66 2214 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 A0A0G2JPF8 293 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 FITM1A5D6W6 292 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 HNRNPCL2B2RXH8 293 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 HNRNPCL3B7ZW38 293 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 H3BNH8 94 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 TNFRSF11BO00300 401 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 HNRNPCL4P0DMR1 293 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 RNH1P13489 461 aaKnown RBP16.56■□□□□ 0.24
CTTN-203ENST00000376561 NT5EP21589 574 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 CD1CP29017 333 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 CSF2RBP32927 897 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 PIGAP37287 484 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 SEPHS1P49903 392 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 SPIBQ01892 262 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 INAVAQ3KP66 663 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 FHL5Q5TD97 284 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 PRAMEF8Q5VWM4 474 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 PRAMEF7Q5VXH5 474 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 TTC23Q5W5X9 447 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 CDC73Q6P1J9 531 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 RMND5BQ96G75 393 aaPredicted RBP16.56■□□□□ 0.24
CTTN-203ENST00000376561 ZNF354BQ96LW1 612 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 MUS81Q96NY9 551 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 DUSP23Q9BVJ7 150 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 BTBD2Q9BX70 525 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 RBCK1Q9BYM8 510 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 FSCN3Q9NQT6 498 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 C19orf53Q9UNZ5 99 aaPredicted RBP16.56■□□□□ 0.24
CTTN-203ENST00000376561 LIPT1Q9Y234 373 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 MYRFQ9Y2G1 1151 aa16.56■□□□□ 0.24
CTTN-203ENST00000376561 FAM32AQ9Y421 112 aaKnown RBP16.56■□□□□ 0.24
CTTN-203ENST00000376561 DUXAA6NLW8 204 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SEC24DO94855 1032 aaPredicted RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 RHCEP18577 417 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 HSD11B2P80365 405 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 PRICKLE4Q2TBC4 344 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SLC16A11Q8NCK7 471 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 ZNF555Q8NEP9 628 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 DOK4Q8TEW6 326 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SLC35A4Q96G79 324 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 PEX11GQ96HA9 241 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 PIP5K1AQ99755 562 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SPATA5L1Q9BVQ7 753 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 GIN1Q9NXP7 522 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 MN1Q10571 1320 aaPredicted RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 RP1P56715 2156 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 A0A087WV62 115 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 PLOD3O60568 738 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 MITFO75030 526 aaPredicted RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 SLITRK5O94991 958 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 CDH12P55289 794 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 MAT1AQ00266 395 aaKnown RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 GRM7Q14831 915 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 HLA-BQ31612 363 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SNAP47Q5SQN1 464 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 ATAD3BQ5T9A4 648 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 FAHD1Q6P587 224 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 TTC33Q6PID6 262 aaPredicted RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 ZNF605Q86T29 641 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 OR4C15Q8NGM1 316 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 ZNF675Q8TD23 568 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SAP25Q8TEE9 199 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 MMABQ96EY8 250 aaPredicted RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 TRNT1Q96Q11 434 aaKnown RBP16.55■□□□□ 0.24
CTTN-203ENST00000376561 MAT2BQ9NZL9 334 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 SEMA5BQ9P283 1151 aa16.55■□□□□ 0.24
CTTN-203ENST00000376561 CASC3O15234 703 aaKnown RBP16.54■□□□□ 0.24
CTTN-203ENST00000376561 SLC35E2P0CK97 266 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 AVPR1BP47901 424 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 ARL4DP49703 201 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 MGAT2Q10469 447 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 SYT16Q17RD7 645 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 FAM214AQ32MH5 1076 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 HEPHL1Q6MZM0 1159 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 C16orf62Q7Z3J2 963 aa16.54■□□□□ 0.24
CTTN-203ENST00000376561 ZNF786Q8N393 782 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms