RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CD1CP29017 333 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 OR1D4P47884 311 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 CHRNEQ04844 493 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 SLC13A2Q13183 592 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 DEF8Q6ZN54 512 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 SDR16C5Q8N3Y7 309 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 ZDHHC12Q96GR4 267 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 ZNF300Q96RE9 604 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 RBM4BQ9BQ04 359 aaKnown RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 RBM4Q9BWF3 364 aaKnown RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 YIPF2Q9BWQ6 316 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 RIBC2Q9H4K1 309 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 NDOR1Q9UHB4 597 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 PLCL2Q9UPR0 1127 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 PADI2Q9Y2J8 665 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 A6NHS1 94 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 TMEM150CB9EJG8 249 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 PCDH17O14917 1159 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 NUDT21O43809 227 aaKnown RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 TPST2O60704 377 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 GPR75O95800 540 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 FOLR1P15328 257 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 MAOAP21397 527 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 ELK4P28324 431 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 EPHA8P29322 1005 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 DNAJA1P31689 397 aaKnown RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 FOXL2P58012 376 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 EXOC3L2Q2M3D2 409 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 PERM1Q5SV97 790 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 Q6ZPB1 254 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 PIWIL3Q7Z3Z3 882 aaKnown RBP11.8□□□□□ -0.52
CLCN6-206ENST00000376496 AMER2Q8N7J2 671 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 ATG16L2Q8NAA4 619 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 SFXN5Q8TD22 340 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 ARSGQ96EG1 525 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 FAM118AQ9NWS6 357 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 MKLN1Q9UL63 735 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 LYVE1Q9Y5Y7 322 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 SPACA6W5XKT8 324 aa11.8□□□□□ -0.52
CLCN6-206ENST00000376496 TNFRSF11BO00300 401 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 FFAR1O14842 300 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 PRKNO60260 465 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-206ENST00000376496 SRPX2O60687 465 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-206ENST00000376496 POU2F1P14859 743 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 GLB1P16278 677 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 FPR1P21462 350 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 MYF6P23409 242 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 IGFBP5P24593 272 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 MAN2A2P49641 1150 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 ARL4DP49703 201 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 PDX1P52945 283 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 RAB38P57729 211 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 DUSP5Q16690 384 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 ZNF628Q5EBL2 1059 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 MANEAQ5SRI9 462 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 MFSD12Q6NUT3 480 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 HIPK1Q86Z02 1210 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 RCBTB1Q8NDN9 531 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 GAREM1Q9H706 876 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 FBXO34Q9NWN3 711 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 ZSCAN32Q9NX65 697 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 CENPVL1A0A0U1RR11 272 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 TMEM247A6NEH6 219 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 CLDN24A6NM45 220 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 SIGLEC6O43699 453 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 HYAL3O43820 417 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-206ENST00000376496 EPPINO95925 133 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 IFNA14P01570 189 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 RFX3P48380 749 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 MLIPQ5VWP3 458 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 TTC33Q6PID6 262 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-206ENST00000376496 TSPYL5Q86VY4 417 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-206ENST00000376496 VRK2Q86Y07 508 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 OR9Q2Q8NGE9 314 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 ADAMTS15Q8TE58 950 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 GEMIN6Q8WXD5 167 aaKnown RBP11.79□□□□□ -0.52
CLCN6-206ENST00000376496 ERVMER34-1Q9H9K5 563 aa11.79□□□□□ -0.52
CLCN6-206ENST00000376496 NPIPA5A0A0B4J1W7 369 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 NPIPA7E9PJI5 369 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 DUX1O43812 170 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 PCDHGA12O60330 932 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 OR2B3O76000 313 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 NPIPA8P0DM63 369 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 ACP2P11117 423 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 IL7RP16871 459 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 HOXA6P31267 233 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 HOXC5Q00444 222 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 BHLHB9Q6PI77 547 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 C16orf62Q7Z3J2 963 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
CLCN6-206ENST00000376496 ASCC3Q8N3C0 2202 aaKnown RBP11.78□□□□□ -0.52
CLCN6-206ENST00000376496 EID2Q8N6I1 236 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 OR1L3Q8NH93 324 aa11.78□□□□□ -0.52
CLCN6-206ENST00000376496 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
CLCN6-206ENST00000376496 PROX1Q92786 737 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms